Analysis of interatomic Contacts of Structural Units in PDB entry:
1FBP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FBP entry

There are 2 chains in PDB entry 1FBP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 6ALA 335
B
 PHE 6ALA 335
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1FBP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
H1A
A
12 23Right-handed alpha
Helix 2
H2A
A
28 51Right-handed alpha
Helix 3
H3A
A
72 89Right-handed alpha
Helix 4
H4A
A
214 219Right-handed alpha
Helix 5
H5A
A
222 232Right-handed alpha
Helix 6
H6A
A
247 258Right-handed alpha
Helix 7
H7A
A
277 291Right-handed alpha
Helix 8
H8A
A
322 334Right-handed alpha
Helix 9
H1B
B
12 23Right-handed alpha
Helix 10
H2B
B
28 51Right-handed alpha
Helix 11
H3B
B
72 89Right-handed alpha
Helix 12
H4B
B
214 219Right-handed alpha
Helix 13
H5B
B
222 232Right-handed alpha
Helix 14
H6B
B
247 258Right-handed alpha
Helix 15
H7B
B
277 291Right-handed alpha
Helix 16
H8B
B
322 334Right-handed alpha
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There are 4 sheets in PDB entry 1FBP. Click on sheet of interest to get list of strands forming it: SAA, SBA, SAB, SBB,

There are 8 strands in SAA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 105first strand
Strand 2
A
92 95anti-parallel
Strand 3
A
113 118parallel
Strand 4
A
132 139anti-parallel
Strand 5
A
160 167anti-parallel
Strand 6
A
172 176anti-parallel
Strand 7
A
181 187anti-parallel
Strand 8
A
192 200anti-parallel
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There are 5 strands in SBA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
240 244first strand
Strand 2
A
207 212parallel
Strand 3
A
260 264parallel
Strand 4
A
316 320anti-parallel
Strand 5
A
293 296anti-parallel
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There are 8 strands in SAB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
103 105first strand
Strand 2
B
92 95anti-parallel
Strand 3
B
113 118parallel
Strand 4
B
132 139anti-parallel
Strand 5
B
160 167anti-parallel
Strand 6
B
172 176anti-parallel
Strand 7
B
181 187anti-parallel
Strand 8
B
192 200anti-parallel
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There are 5 strands in SBB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
240 244first strand
Strand 2
B
207 212parallel
Strand 3
B
260 264parallel
Strand 4
B
316 320anti-parallel
Strand 5
B
293 296anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il