Analysis of interatomic Contacts of Structural Units in PDB entry:
1FBY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FBY entry

There are 2 chains in PDB entry 1FBY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 224PRO 458
B
 ASP 1229PRO 1458
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 1FBY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
225 230Right-handed alpha
Helix 2
2
A
231 243Right-handed alpha
Helix 3
3
A
263 285Right-handed alpha
Helix 4
4
A
288 292Right-handed 310
Helix 5
5
A
293 317Right-handed alpha
Helix 6
6
A
318 320Right-handed 310
Helix 7
7
A
334 341Right-handed alpha
Helix 8
8
A
342 353Right-handed alpha
Helix 9
9
A
353 361Right-handed alpha
Helix 10
10
A
363 376Right-handed alpha
Helix 11
11
A
385 408Right-handed alpha
Helix 12
12
A
413 420Right-handed alpha
Helix 13
13
A
420 442Right-handed alpha
Helix 14
14
A
451 456Right-handed 310
Helix 15
15
B
1231 1242Right-handed alpha
Helix 16
16
B
1263 1285Right-handed alpha
Helix 17
17
B
1293 1317Right-handed alpha
Helix 18
18
B
1318 1320Right-handed 310
Helix 19
19
B
1334 1341Right-handed alpha
Helix 20
20
B
1342 1353Right-handed alpha
Helix 21
21
B
1353 1359Right-handed alpha
Helix 22
22
B
1363 1376Right-handed alpha
Helix 23
23
B
1385 1408Right-handed alpha
Helix 24
24
B
1413 1419Right-handed alpha
Helix 25
25
B
1420 1442Right-handed alpha
Helix 26
26
B
1452 1456Right-handed 310
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There are 2 sheets in PDB entry 1FBY. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 325first strand
Strand 2
A
331 333anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1323 1325first strand
Strand 2
B
1331 1333anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il