Analysis of interatomic Contacts of Structural Units in PDB entry:
1FDS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FDS entry

There is 1 chain in PDB entry 1FDS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1VAL 287
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 1FDS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 23Right-handed alpha
Helix 2
3
A
43 51Right-handed alpha
Helix 3
4
A
69 78Right-handed alpha
Helix 4
6
A
104 114Right-handed alpha
Helix 5
7
A
116 132Right-handed alpha
Helix 6
9
A
153 176Right-handed alpha
Helix 7
10
A
200 205Right-handed alpha
Helix 8
11
A
209 229Right-handed alpha
Helix 9
12
A
233 245Right-handed alpha
Helix 10
13
A
260 267Right-handed alpha
Helix 11
14
A
273 283Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1FDS.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
252 254first strand
Strand 2
A
178 185parallel
Strand 3
A
135 142parallel
Strand 4
A
86 89parallel
Strand 5
A
3 7parallel
Strand 6
A
30 36parallel
Strand 7
A
59 63parallel
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