Analysis of interatomic Contacts of Structural Units in PDB entry:
1FDW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FDW entry

There is 1 chain in PDB entry 1FDW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1GLY 285
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 1FDW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 23Right-handed alpha
Helix 2
2
A
39 51Right-handed 310
Helix 3
3
A
69 78Right-handed alpha
Helix 4
4
A
99 101Right-handed 310
Helix 5
5
A
104 114Right-handed alpha
Helix 6
6
A
116 132Right-handed alpha
Helix 7
7
A
143 145Right-handed 310
Helix 8
8
A
153 176Right-handed alpha
Helix 9
9
A
200 205Right-handed alpha
Helix 10
10
A
209 229Right-handed alpha
Helix 11
11
A
233 245Right-handed alpha
Helix 12
12
A
258 264Right-handed 310
Helix 13
13
A
273 283Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1FDW.

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
252 254first strand
Strand 2
A
178 185parallel
Strand 3
A
135 142parallel
Strand 4
A
86 89parallel
Strand 5
A
3 8parallel
Strand 6
A
30 36parallel
Strand 7
A
59 63parallel
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