Analysis of interatomic Contacts of Structural Units in PDB entry:
1FEB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FEB entry

There are 2 chains in PDB entry 1FEB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1ASP 487
B
 SER 1GLU 484
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 1FEB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 26Right-handed alpha
Helix 2
2
A
49 54Right-handed alpha
Helix 3
3
A
56 78Right-handed alpha
Helix 4
4
A
84 86Right-handed 310
Helix 5
5
A
91 114Right-handed alpha
Helix 6
6
A
171 173Right-handed 310
Helix 7
7
A
177 182Right-handed alpha
Helix 8
8
A
197 209Right-handed alpha
Helix 9
9
A
231 243Right-handed alpha
Helix 10
10
A
295 298Right-handed alpha
Helix 11
11
A
325 328Right-handed 310
Helix 12
12
A
334 349Right-handed alpha
Helix 13
13
A
378 384Right-handed alpha
Helix 14
14
A
398 402Right-handed 310
Helix 15
15
A
433 445Right-handed alpha
Helix 16
16
A
450 454Right-handed alpha
Helix 17
17
A
464 468Right-handed 310
Helix 18
18
B
13 25Right-handed alpha
Helix 19
19
B
49 54Right-handed alpha
Helix 20
20
B
56 76Right-handed alpha
Helix 21
21
B
84 86Right-handed 310
Helix 22
22
B
91 114Right-handed alpha
Helix 23
23
B
171 173Right-handed 310
Helix 24
24
B
177 182Right-handed alpha
Helix 25
25
B
197 209Right-handed alpha
Helix 26
26
B
231 244Right-handed alpha
Helix 27
27
B
295 298Right-handed 310
Helix 28
28
B
326 328Right-handed 310
Helix 29
29
B
334 349Right-handed alpha
Helix 30
30
B
378 382Right-handed alpha
Helix 31
31
B
398 403Right-handed alpha
Helix 32
32
B
433 446Right-handed alpha
Helix 33
33
B
450 453Right-handed alpha
Helix 34
34
B
464 468Right-handed 310
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There are 12 sheets in PDB entry 1FEB. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
321 323first strand
Strand 2
A
154 157parallel
Strand 3
A
6 9parallel
Strand 4
A
30 34parallel
Strand 5
A
119 123parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 163first strand
Strand 2
A
286 288anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
279 282first strand
Strand 2
A
189 193parallel
Strand 3
A
215 220parallel
Strand 4
A
247 250parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
274 277first strand
Strand 2
A
265 269anti-parallel
Strand 3
A
254 259anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
363 365first strand
Strand 2
A
371 375anti-parallel
Strand 3
A
422 429anti-parallel
Strand 4
A
409 417anti-parallel
Strand 5
A
387 396anti-parallel
Strand 6
A
475 478anti-parallel
Strand 7
A
481 483anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
321 323first strand
Strand 2
B
154 157parallel
Strand 3
B
6 9parallel
Strand 4
B
30 34parallel
Strand 5
B
119 123parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 163first strand
Strand 2
B
286 288anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
279 282first strand
Strand 2
B
189 193parallel
Strand 3
B
215 220parallel
Strand 4
B
246 250parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
274 277first strand
Strand 2
B
265 269anti-parallel
Strand 3
B
254 259anti-parallel
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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
363 365first strand
Strand 2
B
371 375anti-parallel
Strand 3
B
422 429anti-parallel
Strand 4
B
409 417anti-parallel
Strand 5
B
387 396anti-parallel
Strand 6
B
475 478anti-parallel
Strand 7
B
481 483anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 130first strand
Strand 2
A
133 137anti-parallel
Strand 3
A
146 151anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
125 130first strand
Strand 2
B
133 137anti-parallel
Strand 3
B
146 151anti-parallel
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