Analysis of interatomic Contacts of Structural Units in PDB entry:
1FEZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FEZ entry

There are 4 chains in PDB entry 1FEZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 5GLU 260
B
 LYS 5GLU 260
C
 LYS 5GLU 260
D
 LYS 5GLU 260
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 52 helices in PDB entry 1FEZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 36Right-handed alpha
Helix 2
2
A
42 47Right-handed alpha
Helix 3
3
A
52 63Right-handed alpha
Helix 4
4
A
63 74Right-handed alpha
Helix 5
5
A
79 98Right-handed alpha
Helix 6
6
A
99 102Right-handed 310
Helix 7
7
A
107 118Right-handed alpha
Helix 8
8
A
129 143Right-handed alpha
Helix 9
9
A
163 174Right-handed alpha
Helix 10
10
A
177 179Right-handed 310
Helix 11
11
A
187 198Right-handed alpha
Helix 12
12
A
222 240Right-handed alpha
Helix 13
13
A
251 259Right-handed alpha
Helix 14
14
B
23 35Right-handed alpha
Helix 15
15
B
43 47Right-handed 310
Helix 16
16
B
52 61Right-handed alpha
Helix 17
17
B
63 75Right-handed alpha
Helix 18
18
B
79 98Right-handed alpha
Helix 19
19
B
107 118Right-handed alpha
Helix 20
20
B
129 143Right-handed alpha
Helix 21
21
B
163 174Right-handed alpha
Helix 22
22
B
177 179Right-handed 310
Helix 23
23
B
187 198Right-handed alpha
Helix 24
24
B
222 239Right-handed alpha
Helix 25
25
B
248 250Right-handed 310
Helix 26
26
B
251 259Right-handed alpha
Helix 27
27
C
23 36Right-handed alpha
Helix 28
28
C
42 47Right-handed alpha
Helix 29
29
C
52 63Right-handed alpha
Helix 30
30
C
63 74Right-handed alpha
Helix 31
31
C
79 98Right-handed alpha
Helix 32
32
C
99 102Right-handed 310
Helix 33
33
C
107 118Right-handed alpha
Helix 34
34
C
129 143Right-handed alpha
Helix 35
35
C
163 174Right-handed alpha
Helix 36
36
C
177 179Right-handed 310
Helix 37
37
C
187 198Right-handed alpha
Helix 38
38
C
222 240Right-handed alpha
Helix 39
39
C
251 259Right-handed alpha
Helix 40
40
D
23 35Right-handed alpha
Helix 41
41
D
43 47Right-handed 310
Helix 42
42
D
52 61Right-handed alpha
Helix 43
43
D
63 75Right-handed alpha
Helix 44
44
D
79 98Right-handed alpha
Helix 45
45
D
107 118Right-handed alpha
Helix 46
46
D
129 143Right-handed alpha
Helix 47
47
D
163 174Right-handed alpha
Helix 48
48
D
177 179Right-handed 310
Helix 49
49
D
187 198Right-handed alpha
Helix 50
50
D
222 239Right-handed alpha
Helix 51
51
D
248 250Right-handed 310
Helix 52
52
D
251 259Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 1FEZ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 124first strand
Strand 2
A
8 11parallel
Strand 3
A
181 185parallel
Strand 4
A
201 204parallel
Strand 5
A
244 246parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
121 124first strand
Strand 2
B
8 11parallel
Strand 3
B
181 185parallel
Strand 4
B
200 204parallel
Strand 5
B
244 246parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
121 124first strand
Strand 2
C
8 11parallel
Strand 3
C
181 185parallel
Strand 4
C
201 204parallel
Strand 5
C
244 246parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
121 124first strand
Strand 2
D
8 11parallel
Strand 3
D
181 185parallel
Strand 4
D
200 204parallel
Strand 5
D
244 246parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il