Analysis of interatomic Contacts of Structural Units in PDB entry:
1FG5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FG5 entry

There is 1 chain in PDB entry 1FG5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
N
 LYS 1THR 277
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 1FG5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
N
3 8Right-handed alpha
Helix 2
2
N
9 13Right-handed 310
Helix 3
3
N
33 43Right-handed alpha
Helix 4
4
N
56 61Right-handed alpha
Helix 5
5
N
62 74Right-handed alpha
Helix 6
6
N
118 132Right-handed alpha
Helix 7
7
N
132 137Right-handed alpha
Helix 8
8
N
154 158Right-handed 310
Helix 9
9
N
206 226Right-handed alpha
Helix 10
10
N
233 246Right-handed alpha
Helix 11
11
N
254 257Right-handed 310
Helix 12
12
N
259 263Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 1FG5. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
26 27first strand
Strand 2
N
250 252parallel
Strand 3
N
161 165parallel
Strand 4
N
198 205anti-parallel
Strand 5
N
139 144anti-parallel
Strand 6
N
48 54parallel
Strand 7
N
80 86parallel
Strand 8
N
101 107parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
147 149first strand
Strand 2
N
273 275anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il