Analysis of interatomic Contacts of Structural Units in PDB entry:
1FIY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FIY entry

There is 1 chain in PDB entry 1FIY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 4GLY 883
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 1FIY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 26Right-handed alpha
Helix 2
2
A
30 47Right-handed alpha
Helix 3
3
A
52 61Right-handed alpha
Helix 4
4
A
65 91Right-handed alpha
Helix 5
5
A
102 112Right-handed alpha
Helix 6
6
A
119 127Right-handed alpha
Helix 7
7
A
148 162Right-handed alpha
Helix 8
8
A
168 187Right-handed alpha
Helix 9
9
A
198 211Right-handed alpha
Helix 10
10
A
213 232Right-handed alpha
Helix 11
11
A
261 289Right-handed alpha
Helix 12
12
A
297 301Right-handed alpha
Helix 13
13
A
311 335Right-handed alpha
Helix 14
14
A
349 365Right-handed alpha
Helix 15
15
A
369 372Right-handed alpha
Helix 16
16
A
375 385Right-handed alpha
Helix 17
17
A
399 413Right-handed alpha
Helix 18
18
A
418 420Right-handed 310
Helix 19
19
A
423 435Right-handed alpha
Helix 20
20
A
449 463Right-handed alpha
Helix 21
21
A
480 492Right-handed alpha
Helix 22
22
A
508 523Right-handed alpha
Helix 23
23
A
525 531Right-handed alpha
Helix 24
24
A
541 548Right-handed alpha
Helix 25
25
A
550 571Right-handed alpha
Helix 26
26
A
589 597Right-handed alpha
Helix 27
27
A
614 621Right-handed 310
Helix 28
28
A
624 643Right-handed alpha
Helix 29
29
A
651 672Right-handed alpha
Helix 30
30
A
678 685Right-handed alpha
Helix 31
31
A
688 693Right-handed alpha
Helix 32
32
A
714 724Right-handed alpha
Helix 33
33
A
728 730Right-handed 310
Helix 34
34
A
732 744Right-handed alpha
Helix 35
35
A
746 756Right-handed 310
Helix 36
36
A
758 773Right-handed alpha
Helix 37
37
A
776 786Right-handed alpha
Helix 38
38
A
789 813Right-handed 310
Helix 39
39
A
823 855Right-handed alpha
Helix 40
40
A
862 879Right-handed alpha
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There are 3 sheets in PDB entry 1FIY. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 247first strand
Strand 2
A
131 135parallel
Strand 3
A
608 612parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
501 504first strand
Strand 2
A
469 475parallel
Strand 3
A
393 398parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
534 539first strand
Strand 2
A
574 579parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il