Analysis of interatomic Contacts of Structural Units in PDB entry:
1FM6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FM6 entry

There are 8 chains in PDB entry 1FM6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 227PRO 458
D
 PRO 206TYR 477
U
 ASN 227PRO 458
X
 PRO 206TYR 477
B
 HIS 630GLU 639
V
 GLU 628PRO 642
E
 GLU 685SER 700
Y
 THR 684GLU 696
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 1FM6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
231 241Right-handed alpha
Helix 2
2
A
265 286Right-handed alpha
Helix 3
3
A
293 317Right-handed alpha
Helix 4
4
A
334 339Right-handed alpha
Helix 5
5
A
344 353Right-handed alpha
Helix 6
6
A
353 360Right-handed alpha
Helix 7
7
A
363 376Right-handed alpha
Helix 8
8
A
385 408Right-handed alpha
Helix 9
9
A
413 420Right-handed alpha
Helix 10
10
A
421 441Right-handed alpha
Helix 11
11
A
450 455Right-handed alpha
Helix 12
12
D
207 226Right-handed alpha
Helix 13
13
D
229 239Right-handed alpha
Helix 14
14
D
251 260Right-handed alpha
Helix 15
15
D
260 265Right-handed alpha
Helix 16
16
D
276 302Right-handed alpha
Helix 17
17
D
310 331Right-handed alpha
Helix 18
18
D
350 356Right-handed alpha
Helix 19
19
D
359 363Right-handed 310
Helix 20
20
D
364 376Right-handed alpha
Helix 21
21
D
380 393Right-handed alpha
Helix 22
22
D
402 425Right-handed alpha
Helix 23
23
D
430 460Right-handed alpha
Helix 24
24
D
466 474Right-handed alpha
Helix 25
25
U
231 242Right-handed alpha
Helix 26
26
U
246 250Right-handed 310
Helix 27
27
U
265 286Right-handed alpha
Helix 28
28
U
293 317Right-handed alpha
Helix 29
29
U
318 320Right-handed 310
Helix 30
30
U
333 340Right-handed alpha
Helix 31
31
U
342 353Right-handed alpha
Helix 32
32
U
353 361Right-handed alpha
Helix 33
33
U
363 376Right-handed alpha
Helix 34
34
U
385 408Right-handed alpha
Helix 35
35
U
413 420Right-handed alpha
Helix 36
36
U
421 443Right-handed alpha
Helix 37
37
U
448 454Right-handed alpha
Helix 38
38
X
207 226Right-handed alpha
Helix 39
39
X
229 239Right-handed alpha
Helix 40
40
X
251 258Right-handed alpha
Helix 41
41
X
277 301Right-handed alpha
Helix 42
42
X
305 309Right-handed 310
Helix 43
43
X
310 331Right-handed alpha
Helix 44
44
X
350 355Right-handed alpha
Helix 45
45
X
364 376Right-handed alpha
Helix 46
46
X
380 393Right-handed alpha
Helix 47
47
X
402 425Right-handed alpha
Helix 48
48
X
430 460Right-handed alpha
Helix 49
49
X
466 474Right-handed alpha
Helix 50
50
B
630 639Right-handed alpha
Helix 51
51
V
630 639Right-handed alpha
Helix 52
52
E
687 696Right-handed alpha
Helix 53
53
Y
687 696Right-handed alpha
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There are 4 sheets in PDB entry 1FM6. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 325first strand
Strand 2
A
331 333anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
247 249first strand
Strand 2
D
346 349parallel
Strand 3
D
338 341anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
U
324 326first strand
Strand 2
U
330 332anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
247 249first strand
Strand 2
X
346 349parallel
Strand 3
X
338 341anti-parallel
Strand 4
X
334 335anti-parallel
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