Analysis of interatomic Contacts of Structural Units in PDB entry:
1FOE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FOE entry

There are 8 chains in PDB entry 1FOE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 1034GLN 1401
B
 MET 1LEU 177
C
 SER 1036GLN 1401
D
 MET 1LEU 177
E
 LEU 1035GLN 1401
F
 MET 1LEU 177
G
 LEU 1035GLN 1401
H
 MET 1LEU 177
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are113 helices in PDB entry 1FOE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1036 1066Right-handed alpha
Helix 2
2
A
1066 1072Right-handed alpha
Helix 3
3
A
1077 1086Right-handed alpha
Helix 4
4
A
1087 1107Right-handed alpha
Helix 5
5
A
1111 1115Right-handed 310
Helix 6
6
A
1117 1120Right-handed 310
Helix 7
7
A
1121 1136Right-handed alpha
Helix 8
8
A
1137 1140Right-handed 310
Helix 9
9
A
1141 1149Right-handed alpha
Helix 10
10
A
1151 1157Right-handed alpha
Helix 11
11
A
1162 1173Right-handed alpha
Helix 12
12
A
1177 1180Right-handed 310
Helix 13
13
A
1181 1186Right-handed alpha
Helix 14
14
A
1187 1194Right-handed alpha
Helix 15
15
A
1195 1206Right-handed alpha
Helix 16
16
A
1211 1242Right-handed alpha
Helix 17
17
A
1241 1250Right-handed alpha
Helix 18
18
A
1263 1265Right-handed 310
Helix 19
19
A
1279 1284Right-handed alpha
Helix 20
20
A
1364 1367Right-handed 310
Helix 21
21
A
1379 1401Right-handed alpha
Helix 22
22
B
15 26Right-handed alpha
Helix 23
23
B
67 71Right-handed 310
Helix 24
24
B
86 96Right-handed alpha
Helix 25
25
B
96 105Right-handed alpha
Helix 26
26
B
116 120Right-handed 310
Helix 27
27
B
122 132Right-handed alpha
Helix 28
28
B
138 149Right-handed alpha
Helix 29
29
B
164 177Right-handed alpha
Helix 30
30
C
1036 1066Right-handed alpha
Helix 31
31
C
1066 1072Right-handed alpha
Helix 32
32
C
1077 1086Right-handed alpha
Helix 33
33
C
1087 1107Right-handed alpha
Helix 34
34
C
1111 1115Right-handed 310
Helix 35
35
C
1117 1120Right-handed 310
Helix 36
36
C
1121 1136Right-handed alpha
Helix 37
37
C
1137 1140Right-handed 310
Helix 38
38
C
1141 1149Right-handed alpha
Helix 39
39
C
1151 1157Right-handed alpha
Helix 40
40
C
1162 1173Right-handed alpha
Helix 41
41
C
1177 1180Right-handed 310
Helix 42
42
C
1181 1186Right-handed alpha
Helix 43
43
C
1187 1194Right-handed alpha
Helix 44
44
C
1195 1206Right-handed alpha
Helix 45
45
C
1211 1242Right-handed alpha
Helix 46
46
C
1241 1250Right-handed alpha
Helix 47
47
C
1279 1284Right-handed alpha
Helix 48
48
C
1364 1367Right-handed 310
Helix 49
49
C
1379 1397Right-handed alpha
Helix 50
50
D
15 26Right-handed alpha
Helix 51
51
D
67 71Right-handed 310
Helix 52
52
D
86 96Right-handed alpha
Helix 53
53
D
96 105Right-handed alpha
Helix 54
54
D
116 120Right-handed 310
Helix 55
55
D
122 131Right-handed alpha
Helix 56
56
D
138 149Right-handed alpha
Helix 57
57
D
164 177Right-handed alpha
Helix 58
58
E
1036 1066Right-handed alpha
Helix 59
59
E
1066 1072Right-handed alpha
Helix 60
60
E
1077 1086Right-handed alpha
Helix 61
61
E
1087 1107Right-handed alpha
Helix 62
62
E
1111 1115Right-handed 310
Helix 63
63
E
1117 1120Right-handed 310
Helix 64
64
E
1121 1136Right-handed alpha
Helix 65
65
E
1137 1140Right-handed 310
Helix 66
66
E
1141 1149Right-handed alpha
Helix 67
67
E
1151 1157Right-handed alpha
Helix 68
68
E
1162 1173Right-handed alpha
Helix 69
69
E
1177 1180Right-handed 310
Helix 70
70
E
1181 1186Right-handed alpha
Helix 71
71
E
1187 1206Right-handed alpha
Helix 72
72
E
1211 1242Right-handed alpha
Helix 73
73
E
1241 1250Right-handed alpha
Helix 74
74
E
1263 1265Right-handed 310
Helix 75
75
E
1279 1284Right-handed alpha
Helix 76
76
E
1364 1367Right-handed 310
Helix 77
77
E
1379 1401Right-handed alpha
Helix 78
78
F
15 26Right-handed alpha
Helix 79
79
F
67 71Right-handed 310
Helix 80
80
F
86 96Right-handed alpha
Helix 81
81
F
96 105Right-handed alpha
Helix 82
82
F
116 120Right-handed 310
Helix 83
83
F
122 132Right-handed alpha
Helix 84
84
F
138 149Right-handed alpha
Helix 85
85
F
164 177Right-handed alpha
Helix 86
86
G
1036 1066Right-handed alpha
Helix 87
87
G
1066 1072Right-handed alpha
Helix 88
88
G
1077 1086Right-handed alpha
Helix 89
89
G
1087 1107Right-handed alpha
Helix 90
90
G
1111 1115Right-handed 310
Helix 91
91
G
1117 1120Right-handed 310
Helix 92
92
G
1121 1136Right-handed alpha
Helix 93
93
G
1137 1140Right-handed 310
Helix 94
94
G
1141 1149Right-handed alpha
Helix 95
95
G
1151 1157Right-handed alpha
Helix 96
96
G
1162 1173Right-handed alpha
Helix 97
97
G
1177 1180Right-handed 310
Helix 98
98
G
1181 1186Right-handed alpha
Helix 99
99
G
1187 1194Right-handed alpha
Helix 100
100
G
1195 1206Right-handed alpha
Helix 101
101
G
1211 1242Right-handed alpha
Helix 102
102
G
1241 1250Right-handed alpha
Helix 103
103
G
1279 1284Right-handed alpha
Helix 104
104
G
1364 1367Right-handed 310
Helix 105
105
G
1379 1399Right-handed alpha
Helix 106
106
H
15 26Right-handed alpha
Helix 107
107
H
67 71Right-handed 310
Helix 108
108
H
86 96Right-handed alpha
Helix 109
109
H
96 105Right-handed alpha
Helix 110
110
H
116 120Right-handed 310
Helix 111
111
H
122 132Right-handed alpha
Helix 112
112
H
138 149Right-handed alpha
Helix 113
113
H
164 177Right-handed alpha
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There are 8 sheets in PDB entry 1FOE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1332 1336first strand
Strand 2
A
1299 1304anti-parallel
Strand 3
A
1290 1296anti-parallel
Strand 4
A
1267 1275anti-parallel
Strand 5
A
1371 1377anti-parallel
Strand 6
A
1355 1360anti-parallel
Strand 7
A
1340 1343anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 46first strand
Strand 2
B
49 56anti-parallel
Strand 3
B
3 9parallel
Strand 4
B
77 83parallel
Strand 5
B
110 115parallel
Strand 6
B
153 156parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1329 1336first strand
Strand 2
C
1299 1305anti-parallel
Strand 3
C
1290 1296anti-parallel
Strand 4
C
1267 1275anti-parallel
Strand 5
C
1371 1377anti-parallel
Strand 6
C
1355 1360anti-parallel
Strand 7
C
1340 1343anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
40 46first strand
Strand 2
D
49 56anti-parallel
Strand 3
D
3 9parallel
Strand 4
D
77 83parallel
Strand 5
D
110 115parallel
Strand 6
D
153 156parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
1332 1336first strand
Strand 2
E
1299 1304anti-parallel
Strand 3
E
1290 1296anti-parallel
Strand 4
E
1267 1275anti-parallel
Strand 5
E
1371 1377anti-parallel
Strand 6
E
1355 1360anti-parallel
Strand 7
E
1340 1343anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
40 46first strand
Strand 2
F
49 56anti-parallel
Strand 3
F
3 9parallel
Strand 4
F
77 83parallel
Strand 5
F
110 115parallel
Strand 6
F
153 156parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
1331 1336first strand
Strand 2
G
1299 1304anti-parallel
Strand 3
G
1290 1296anti-parallel
Strand 4
G
1267 1275anti-parallel
Strand 5
G
1371 1376anti-parallel
Strand 6
G
1355 1360anti-parallel
Strand 7
G
1340 1343anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
40 46first strand
Strand 2
H
49 56anti-parallel
Strand 3
H
3 9parallel
Strand 4
H
77 83parallel
Strand 5
H
110 115parallel
Strand 6
H
153 156parallel
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