Analysis of interatomic Contacts of Structural Units in PDB entry:
1FP3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FP3 entry

There are 2 chains in PDB entry 1FP3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 402
B
 MET 1ALA 402
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 1FP3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 30Right-handed alpha
Helix 2
2
A
55 72Right-handed alpha
Helix 3
3
A
73 76Right-handed 310
Helix 4
4
A
77 95Right-handed alpha
Helix 5
5
A
121 139Right-handed alpha
Helix 6
6
A
140 160Right-handed alpha
Helix 7
7
A
161 166Right-handed 310
Helix 8
8
A
179 194Right-handed alpha
Helix 9
9
A
196 203Right-handed alpha
Helix 10
10
A
203 216Right-handed alpha
Helix 11
11
A
237 242Right-handed alpha
Helix 12
12
A
245 263Right-handed alpha
Helix 13
13
A
265 277Right-handed alpha
Helix 14
14
A
277 285Right-handed alpha
Helix 15
15
A
313 331Right-handed alpha
Helix 16
16
A
332 350Right-handed alpha
Helix 17
17
A
381 402Right-handed alpha
Helix 18
18
B
1 30Right-handed alpha
Helix 19
19
B
55 72Right-handed alpha
Helix 20
20
B
73 76Right-handed 310
Helix 21
21
B
77 95Right-handed alpha
Helix 22
22
B
121 137Right-handed alpha
Helix 23
23
B
140 160Right-handed alpha
Helix 24
24
B
161 166Right-handed 310
Helix 25
25
B
179 194Right-handed alpha
Helix 26
26
B
196 216Right-handed alpha
Helix 27
27
B
237 242Right-handed alpha
Helix 28
28
B
245 264Right-handed alpha
Helix 29
29
B
265 277Right-handed alpha
Helix 30
30
B
277 285Right-handed alpha
Helix 31
31
B
313 331Right-handed alpha
Helix 32
32
B
332 351Right-handed alpha
Helix 33
33
B
381 402Right-handed alpha
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There are 10 sheets in PDB entry 1FP3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
107 108anti-parallel
Strand 3
A
114 116anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 178first strand
Strand 2
A
228 230anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 219first strand
Strand 2
A
224 225anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 244first strand
Strand 2
A
296 297anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 312first strand
Strand 2
A
361 362anti-parallel
Strand 3
A
368 370anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 54first strand
Strand 2
B
107 108anti-parallel
Strand 3
B
114 116anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
176 178first strand
Strand 2
B
228 230anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
218 219first strand
Strand 2
B
224 225anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
243 244first strand
Strand 2
B
296 297anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
311 312first strand
Strand 2
B
361 362anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il