Analysis of interatomic Contacts of Structural Units in PDB entry:
1FPP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FPP entry

There are 2 chains in PDB entry 1FPP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
PRO 22PRO 421
A
PHE 55GLU 370
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 1FPP. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
B
28 33Right-handed 310
Helix 2
2
B
43 65Right-handed alpha
Helix 3
3
B
75 85Right-handed alpha
Helix 4
4
B
91 96Right-handed 310
Helix 5
5
B
100 114Right-handed alpha
Helix 6
6
B
120 133Right-handed alpha
Helix 7
7
B
150 163Right-handed alpha
Helix 8
8
B
166 171Right-handed alpha
Helix 9
9
B
174 183Right-handed alpha
Helix 10
10
B
201 213Right-handed alpha
Helix 11
11
B
225 232Right-handed alpha
Helix 12
12
B
249 261Right-handed alpha
Helix 13
13
B
265 267Right-handed 310
Helix 14
14
B
270 280Right-handed alpha
Helix 15
15
B
298 303Right-handed 310
Helix 16
16
B
305 318Right-handed 310
Helix 17
17
B
332 342Right-handed alpha
Helix 18
18
B
360 374Right-handed alpha
Helix 19
19
B
390 392Right-handed 310
Helix 20
20
B
405 416Right-handed alpha
Helix 21
21
A
66 68Right-handed 310
Helix 22
22
A
94 108Right-handed alpha
Helix 23
23
A
114 126Right-handed alpha
Helix 24
24
A
131 143Right-handed alpha
Helix 25
25
A
148 161Right-handed alpha
Helix 26
26
A
166 178Right-handed alpha
Helix 27
27
A
185 195Right-handed alpha
Helix 28
28
A
200 212Right-handed alpha
Helix 29
29
A
216 229Right-handed 310
Helix 30
30
A
234 246Right-handed alpha
Helix 31
31
A
253 269Right-handed alpha
Helix 32
32
A
274 285Right-handed alpha
Helix 33
33
A
289 291Right-handed 310
Helix 34
34
A
294 303Right-handed alpha
Helix 35
35
A
309 325Right-handed alpha
Helix 36
36
A
330 346Right-handed alpha
Helix 37
37
A
350 367Right-handed 310
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There is 1 sheet ( A) in PDB entry 1FPP.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
375 377first strand
Strand 2
B
382 384anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il