Analysis of interatomic Contacts of Structural Units in PDB entry:
1FPZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FPZ entry

There are 6 chains in PDB entry 1FPZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 25LEU 200
B
 THR 25LEU 200
C
 GLU 23LEU 200
D
 GLU 23LEU 200
E
 THR 25LEU 200
F
 GLU 23LEU 200
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 54 helices in PDB entry 1FPZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
35 38Right-handed 310
Helix 2
2
A
59 71Right-handed alpha
Helix 3
3
A
80 87Right-handed alpha
Helix 4
4
A
91 99Right-handed alpha
Helix 5
5
A
115 132Right-handed alpha
Helix 6
6
A
145 159Right-handed alpha
Helix 7
7
A
163 176Right-handed alpha
Helix 8
8
A
182 190Right-handed alpha
Helix 9
9
A
191 198Right-handed alpha
Helix 10
10
B
35 38Right-handed 310
Helix 11
11
B
59 70Right-handed alpha
Helix 12
12
B
80 87Right-handed alpha
Helix 13
13
B
91 99Right-handed alpha
Helix 14
14
B
115 132Right-handed alpha
Helix 15
15
B
145 159Right-handed alpha
Helix 16
16
B
163 176Right-handed alpha
Helix 17
17
B
182 190Right-handed alpha
Helix 18
18
B
191 198Right-handed alpha
Helix 19
19
C
35 38Right-handed 310
Helix 20
20
C
59 70Right-handed alpha
Helix 21
21
C
80 87Right-handed alpha
Helix 22
22
C
91 99Right-handed alpha
Helix 23
23
C
115 132Right-handed alpha
Helix 24
24
C
145 159Right-handed alpha
Helix 25
25
C
163 176Right-handed alpha
Helix 26
26
C
182 190Right-handed alpha
Helix 27
27
C
191 198Right-handed alpha
Helix 28
28
D
35 38Right-handed 310
Helix 29
29
D
59 70Right-handed alpha
Helix 30
30
D
80 87Right-handed alpha
Helix 31
31
D
91 99Right-handed alpha
Helix 32
32
D
115 132Right-handed alpha
Helix 33
33
D
145 159Right-handed alpha
Helix 34
34
D
163 176Right-handed alpha
Helix 35
35
D
182 190Right-handed alpha
Helix 36
36
D
191 198Right-handed alpha
Helix 37
37
E
35 38Right-handed 310
Helix 38
38
E
59 70Right-handed alpha
Helix 39
39
E
80 87Right-handed alpha
Helix 40
40
E
91 99Right-handed alpha
Helix 41
41
E
115 132Right-handed alpha
Helix 42
42
E
145 159Right-handed alpha
Helix 43
43
E
163 176Right-handed alpha
Helix 44
44
E
182 190Right-handed alpha
Helix 45
45
E
191 198Right-handed alpha
Helix 46
46
F
35 38Right-handed 310
Helix 47
47
F
59 70Right-handed alpha
Helix 48
48
F
80 87Right-handed alpha
Helix 49
49
F
91 99Right-handed alpha
Helix 50
50
F
115 132Right-handed alpha
Helix 51
51
F
145 159Right-handed alpha
Helix 52
52
F
163 176Right-handed alpha
Helix 53
53
F
182 190Right-handed alpha
Helix 54
54
F
191 198Right-handed alpha
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There are 12 sheets in PDB entry 1FPZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 33first strand
Strand 2
A
42 46anti-parallel
Strand 3
A
136 139parallel
Strand 4
A
74 77parallel
Strand 5
A
102 105parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 53first strand
Strand 2
A
56 57anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 33first strand
Strand 2
B
42 46anti-parallel
Strand 3
B
136 139parallel
Strand 4
B
74 77parallel
Strand 5
B
102 105parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 53first strand
Strand 2
B
56 57anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 33first strand
Strand 2
C
42 46anti-parallel
Strand 3
C
136 139parallel
Strand 4
C
74 77parallel
Strand 5
C
102 105parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
52 53first strand
Strand 2
C
56 57anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
30 33first strand
Strand 2
D
42 45anti-parallel
Strand 3
D
136 139parallel
Strand 4
D
74 77parallel
Strand 5
D
102 105parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
52 53first strand
Strand 2
D
56 57anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
30 33first strand
Strand 2
E
42 46anti-parallel
Strand 3
E
136 139parallel
Strand 4
E
74 77parallel
Strand 5
E
102 105parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
52 53first strand
Strand 2
E
56 57anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
30 33first strand
Strand 2
F
42 46anti-parallel
Strand 3
F
136 139parallel
Strand 4
F
74 77parallel
Strand 5
F
102 105parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
52 53first strand
Strand 2
F
56 57anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il