Analysis of interatomic Contacts of Structural Units in PDB entry:
1FQJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FQJ entry

There are 5 chains in PDB entry 1FQJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 28LEU 344
B
 ASP 286ILE 418
C
 PHE 50ILE 87
D
 ARG 28GLU 342
E
 PHE 277ALA 417
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 1FQJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
41 54Right-handed alpha
Helix 2
2
A
58 64Right-handed alpha
Helix 3
3
A
65 87Right-handed alpha
Helix 4
4
A
94 110Right-handed alpha
Helix 5
5
A
116 128Right-handed alpha
Helix 6
6
A
129 137Right-handed alpha
Helix 7
7
A
138 142Right-handed 310
Helix 8
8
A
147 153Right-handed alpha
Helix 9
9
A
154 159Right-handed alpha
Helix 10
10
A
166 172Right-handed alpha
Helix 11
11
A
200 211Right-handed 310
Helix 12
12
A
224 228Right-handed 310
Helix 13
13
A
237 251Right-handed alpha
Helix 14
14
A
252 256Right-handed 310
Helix 15
15
A
266 274Right-handed alpha
Helix 16
16
A
278 282Right-handed 310
Helix 17
17
A
291 305Right-handed alpha
Helix 18
18
A
324 343Right-handed alpha
Helix 19
19
B
289 296Right-handed alpha
Helix 20
20
B
299 305Right-handed alpha
Helix 21
21
B
306 320Right-handed alpha
Helix 22
22
B
323 338Right-handed alpha
Helix 23
23
B
342 355Right-handed alpha
Helix 24
24
B
366 377Right-handed alpha
Helix 25
25
B
385 399Right-handed alpha
Helix 26
26
B
399 407Right-handed alpha
Helix 27
27
B
407 416Right-handed alpha
Helix 28
28
C
61 66Right-handed alpha
Helix 29
29
C
68 74Right-handed 310
Helix 30
30
C
77 84Right-handed alpha
Helix 31
31
D
41 53Right-handed alpha
Helix 32
32
D
58 64Right-handed alpha
Helix 33
33
D
64 87Right-handed alpha
Helix 34
34
D
94 108Right-handed alpha
Helix 35
35
D
116 128Right-handed alpha
Helix 36
36
D
129 137Right-handed alpha
Helix 37
37
D
138 142Right-handed 310
Helix 38
38
D
147 153Right-handed alpha
Helix 39
39
D
154 160Right-handed alpha
Helix 40
40
D
166 173Right-handed alpha
Helix 41
41
D
200 211Right-handed 310
Helix 42
42
D
224 228Right-handed 310
Helix 43
43
D
237 251Right-handed alpha
Helix 44
44
D
266 275Right-handed alpha
Helix 45
45
D
278 282Right-handed 310
Helix 46
46
D
294 305Right-handed alpha
Helix 47
47
D
306 312Right-handed 310
Helix 48
48
D
324 341Right-handed alpha
Helix 49
49
E
289 296Right-handed alpha
Helix 50
50
E
299 305Right-handed alpha
Helix 51
51
E
306 320Right-handed alpha
Helix 52
52
E
323 338Right-handed alpha
Helix 53
53
E
339 341Right-handed 310
Helix 54
54
E
342 355Right-handed alpha
Helix 55
55
E
366 377Right-handed alpha
Helix 56
56
E
385 400Right-handed alpha
Helix 57
57
E
400 405Right-handed alpha
Helix 58
58
E
407 416Right-handed alpha
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There are 2 sheets in PDB entry 1FQJ. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 187first strand
Strand 2
A
190 197anti-parallel
Strand 3
A
29 36parallel
Strand 4
A
216 222parallel
Strand 5
A
259 265parallel
Strand 6
A
316 319parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
180 187first strand
Strand 2
D
190 197anti-parallel
Strand 3
D
29 36parallel
Strand 4
D
216 222parallel
Strand 5
D
259 265parallel
Strand 6
D
316 319parallel
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