Analysis of interatomic Contacts of Structural Units in PDB entry:
1FS0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FS0 entry

There are 2 chains in PDB entry 1FS0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 ALA 1THR 134
G
 LYS 19LYS 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 8 helices in PDB entry 1FS0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
E
86 103Right-handed alpha
Helix 2
2
E
113 133Right-handed alpha
Helix 3
3
G
19 58Right-handed alpha
Helix 4
4
G
65 69Right-handed 310
Helix 5
5
G
90 109Right-handed alpha
Helix 6
6
G
119 130Right-handed alpha
Helix 7
7
G
146 162Right-handed alpha
Helix 8
8
G
211 248Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 1FS0. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
59 64first strand
Strand 2
E
48 54anti-parallel
Strand 3
E
14 26anti-parallel
Strand 4
E
4 10anti-parallel
Strand 5
E
76 80parallel
Strand 6
E
67 71anti-parallel
Strand 7
E
41 45anti-parallel
Strand 8
G
207 209parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
59 64first strand
Strand 2
E
48 54anti-parallel
Strand 3
E
14 26anti-parallel
Strand 4
E
31 34anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
133 137first strand
Strand 2
G
112 118parallel
Strand 3
G
75 81parallel
Strand 4
G
168 177parallel
Strand 5
G
180 189anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il