Analysis of interatomic Contacts of Structural Units in PDB entry:
1FS6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FS6 entry

There is 1 chain in PDB entry 1FS6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 266
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 1FS6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 28Right-handed alpha
Helix 2
2
A
45 58Right-handed alpha
Helix 3
3
A
84 93Right-handed alpha
Helix 4
4
A
94 97Right-handed 310
Helix 5
5
A
100 102Right-handed 310
Helix 6
6
A
113 129Right-handed alpha
Helix 7
7
A
163 172Right-handed alpha
Helix 8
8
A
189 195Right-handed alpha
Helix 9
9
A
205 207Right-handed 310
Helix 10
10
A
208 217Right-handed alpha
Helix 11
11
A
224 232Right-handed 310
Helix 12
12
A
241 245Right-handed 310
Helix 13
13
A
248 259Right-handed alpha
Helix 14
14
A
260 264Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 1FS6. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 5first strand
Strand 2
A
235 239parallel
Strand 3
A
199 203parallel
Strand 4
A
133 136parallel
Strand 5
A
35 39parallel
Strand 6
A
66 70parallel
Strand 7
A
104 105parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 74first strand
Strand 2
A
184 187anti-parallel
Strand 3
A
158 161anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il