Analysis of interatomic Contacts of Structural Units in PDB entry:
1FSK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FSK entry

There are 12 chains in PDB entry 1FSK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 1ASN 159
B
ASN 1CYS 214
C
GLN 1CYS 220
D
GLY 1ASN 159
E
ASN 1CYS 214
F
GLN 1CYS 220
G
GLY 1ASN 159
H
ASN 1CYS 214
I
GLN 1CYS 220
J
GLY 1ASN 159
K
ASN 1CYS 214
L
GLN 1CYS 220
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 1FSK. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
14 23Right-handed alpha
Helix 2
2
A
25 34Right-handed alpha
Helix 3
3
A
129 154Right-handed alpha
Helix 4
4
B
121 126Right-handed alpha
Helix 5
5
B
183 188Right-handed alpha
Helix 6
6
C
28 32Right-handed 310
Helix 7
7
C
62 65Right-handed 310
Helix 8
8
C
74 76Right-handed 310
Helix 9
9
C
87 91Right-handed 310
Helix 10
10
C
191 196Right-handed alpha
Helix 11
11
C
205 208Right-handed 310
Helix 12
12
D
14 23Right-handed alpha
Helix 13
13
D
25 34Right-handed alpha
Helix 14
14
D
129 154Right-handed alpha
Helix 15
15
E
121 126Right-handed alpha
Helix 16
16
E
183 188Right-handed alpha
Helix 17
17
F
28 32Right-handed 310
Helix 18
18
F
62 65Right-handed 310
Helix 19
19
F
74 76Right-handed 310
Helix 20
20
F
87 91Right-handed 310
Helix 21
21
F
191 196Right-handed alpha
Helix 22
22
F
205 207Right-handed 310
Helix 23
23
G
14 23Right-handed alpha
Helix 24
24
G
25 34Right-handed alpha
Helix 25
25
G
129 154Right-handed alpha
Helix 26
26
H
121 126Right-handed alpha
Helix 27
27
H
183 188Right-handed alpha
Helix 28
28
I
28 32Right-handed 310
Helix 29
29
I
62 65Right-handed 310
Helix 30
30
I
74 76Right-handed 310
Helix 31
31
I
87 91Right-handed 310
Helix 32
32
I
191 196Right-handed alpha
Helix 33
33
I
205 207Right-handed 310
Helix 34
34
J
14 23Right-handed alpha
Helix 35
35
J
25 34Right-handed alpha
Helix 36
36
J
129 154Right-handed alpha
Helix 37
37
K
121 126Right-handed alpha
Helix 38
38
K
183 188Right-handed alpha
Helix 39
39
L
28 32Right-handed 310
Helix 40
40
L
62 65Right-handed 310
Helix 41
41
L
74 76Right-handed 310
Helix 42
42
L
87 91Right-handed 310
Helix 43
43
L
191 196Right-handed alpha
Helix 44
44
L
205 208Right-handed 310
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There are 55 sheets in PDB entry 1FSK. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR, AS, AT, AU, AV, AW, AX, AY, AZ, BA, BB, BC,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
40 45first strand
Strand 2
A
53 57anti-parallel
Strand 3
A
66 75anti-parallel
Strand 4
A
80 87anti-parallel
Strand 5
A
95 106anti-parallel
Strand 6
A
112 117anti-parallel
Strand 7
A
10 11anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
40 45first strand
Strand 2
A
53 57anti-parallel
Strand 3
A
66 75anti-parallel
Strand 4
A
80 87anti-parallel
Strand 5
A
95 106anti-parallel
Strand 6
A
120 122anti-parallel
Strand 7
A
2 3anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
4 7first strand
Strand 2
B
19 25anti-parallel
Strand 3
B
70 75anti-parallel
Strand 4
B
62 67anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
10 14first strand
Strand 2
B
102 107parallel
Strand 3
B
84 90anti-parallel
Strand 4
B
33 38anti-parallel
Strand 5
B
46 48anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
10 14first strand
Strand 2
B
102 107parallel
Strand 3
B
84 90anti-parallel
Strand 4
B
97 98anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
115 118first strand
Strand 2
B
129 139anti-parallel
Strand 3
B
173 182anti-parallel
Strand 4
B
159 160anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
153 155first strand
Strand 2
B
145 150anti-parallel
Strand 3
B
191 197anti-parallel
Strand 4
B
205 210anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
3 5first strand
Strand 2
C
18 25anti-parallel
Strand 3
C
78 83anti-parallel
Strand 4
C
68 73anti-parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
103 108first strand
Strand 2
C
92 100anti-parallel
Strand 3
C
34 39anti-parallel
Strand 4
C
45 52anti-parallel
Strand 5
C
57 60anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
103 108first strand
Strand 2
C
92 100anti-parallel
Strand 3
C
112 116anti-parallel
Strand 4
C
9 12parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
125 128first strand
Strand 2
C
144 150anti-parallel
Strand 3
C
179 185anti-parallel
Strand 4
C
169 170anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
125 128first strand
Strand 2
C
144 150anti-parallel
Strand 3
C
179 185anti-parallel
Strand 4
C
174 176anti-parallel
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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
140 141first strand
Strand 2
C
188 189anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
156 159first strand
Strand 2
C
198 204anti-parallel
Strand 3
C
209 215anti-parallel
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There are 7 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
40 45first strand
Strand 2
D
53 57anti-parallel
Strand 3
D
66 75anti-parallel
Strand 4
D
80 87anti-parallel
Strand 5
D
95 106anti-parallel
Strand 6
D
112 117anti-parallel
Strand 7
D
10 11anti-parallel
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There are 7 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
40 45first strand
Strand 2
D
53 57anti-parallel
Strand 3
D
66 75anti-parallel
Strand 4
D
80 87anti-parallel
Strand 5
D
95 106anti-parallel
Strand 6
D
120 122anti-parallel
Strand 7
D
2 3anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
4 7first strand
Strand 2
E
19 25anti-parallel
Strand 3
E
70 75anti-parallel
Strand 4
E
62 67anti-parallel
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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
10 14first strand
Strand 2
E
102 107parallel
Strand 3
E
84 90anti-parallel
Strand 4
E
33 38anti-parallel
Strand 5
E
46 48anti-parallel
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There are 4 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
10 14first strand
Strand 2
E
102 107parallel
Strand 3
E
84 90anti-parallel
Strand 4
E
97 98anti-parallel
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There are 4 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
115 118first strand
Strand 2
E
129 139anti-parallel
Strand 3
E
173 182anti-parallel
Strand 4
E
159 160anti-parallel
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There are 4 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
153 155first strand
Strand 2
E
145 150anti-parallel
Strand 3
E
191 197anti-parallel
Strand 4
E
205 210anti-parallel
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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
3 5first strand
Strand 2
F
18 25anti-parallel
Strand 3
F
78 83anti-parallel
Strand 4
F
68 73anti-parallel
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There are 5 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
103 108first strand
Strand 2
F
92 100anti-parallel
Strand 3
F
34 39anti-parallel
Strand 4
F
45 52anti-parallel
Strand 5
F
57 60anti-parallel
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There are 4 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
103 108first strand
Strand 2
F
92 100anti-parallel
Strand 3
F
112 116anti-parallel
Strand 4
F
9 12parallel
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There are 4 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
125 128first strand
Strand 2
F
144 150anti-parallel
Strand 3
F
179 185anti-parallel
Strand 4
F
169 170anti-parallel
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There are 4 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
125 128first strand
Strand 2
F
144 150anti-parallel
Strand 3
F
179 185anti-parallel
Strand 4
F
174 176anti-parallel
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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
140 141first strand
Strand 2
F
188 189anti-parallel
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There are 6 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
156 159first strand
Strand 2
F
198 204anti-parallel
Strand 3
F
209 215anti-parallel
Strand 4
I
209 215anti-parallel
Strand 5
I
198 204anti-parallel
Strand 6
I
156 159anti-parallel
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There are 7 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
40 45first strand
Strand 2
G
53 57anti-parallel
Strand 3
G
66 75anti-parallel
Strand 4
G
80 87anti-parallel
Strand 5
G
95 106anti-parallel
Strand 6
G
112 117anti-parallel
Strand 7
G
10 11anti-parallel
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There are 7 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
40 45first strand
Strand 2
G
53 57anti-parallel
Strand 3
G
66 75anti-parallel
Strand 4
G
80 87anti-parallel
Strand 5
G
95 106anti-parallel
Strand 6
G
120 122anti-parallel
Strand 7
G
2 3anti-parallel
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There are 4 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
4 7first strand
Strand 2
H
19 25anti-parallel
Strand 3
H
70 75anti-parallel
Strand 4
H
62 67anti-parallel
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There are 5 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
10 14first strand
Strand 2
H
102 107parallel
Strand 3
H
84 90anti-parallel
Strand 4
H
33 38anti-parallel
Strand 5
H
46 48anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
10 14first strand
Strand 2
H
102 107parallel
Strand 3
H
84 90anti-parallel
Strand 4
H
97 98anti-parallel
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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
115 118first strand
Strand 2
H
129 139anti-parallel
Strand 3
H
173 182anti-parallel
Strand 4
H
159 160anti-parallel
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There are 4 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
153 155first strand
Strand 2
H
145 150anti-parallel
Strand 3
H
191 197anti-parallel
Strand 4
H
205 210anti-parallel
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There are 4 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
3 5first strand
Strand 2
I
18 25anti-parallel
Strand 3
I
78 83anti-parallel
Strand 4
I
68 73anti-parallel
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There are 5 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
103 108first strand
Strand 2
I
92 100anti-parallel
Strand 3
I
34 39anti-parallel
Strand 4
I
45 52anti-parallel
Strand 5
I
57 60anti-parallel
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There are 4 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
103 108first strand
Strand 2
I
92 100anti-parallel
Strand 3
I
112 116anti-parallel
Strand 4
I
9 12parallel
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There are 4 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
125 128first strand
Strand 2
I
144 150anti-parallel
Strand 3
I
179 185anti-parallel
Strand 4
I
169 170anti-parallel
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There are 4 strands in AN sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
125 128first strand
Strand 2
I
144 150anti-parallel
Strand 3
I
179 185anti-parallel
Strand 4
I
174 176anti-parallel
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There are 2 strands in AO sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
I
140 141first strand
Strand 2
I
188 189anti-parallel
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There are 7 strands in AP sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
40 45first strand
Strand 2
J
53 57anti-parallel
Strand 3
J
66 75anti-parallel
Strand 4
J
80 87anti-parallel
Strand 5
J
95 106anti-parallel
Strand 6
J
112 117anti-parallel
Strand 7
J
10 11anti-parallel
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There are 7 strands in AQ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
J
40 45first strand
Strand 2
J
53 57anti-parallel
Strand 3
J
66 75anti-parallel
Strand 4
J
80 87anti-parallel
Strand 5
J
95 106anti-parallel
Strand 6
J
120 122anti-parallel
Strand 7
J
2 3anti-parallel
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There are 4 strands in AR sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
4 7first strand
Strand 2
K
19 25anti-parallel
Strand 3
K
70 75anti-parallel
Strand 4
K
62 67anti-parallel
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There are 5 strands in AS sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
10 14first strand
Strand 2
K
102 107parallel
Strand 3
K
84 90anti-parallel
Strand 4
K
33 38anti-parallel
Strand 5
K
46 48anti-parallel
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There are 4 strands in AT sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
10 14first strand
Strand 2
K
102 107parallel
Strand 3
K
84 90anti-parallel
Strand 4
K
97 98anti-parallel
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There are 4 strands in AU sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
115 118first strand
Strand 2
K
129 139anti-parallel
Strand 3
K
173 182anti-parallel
Strand 4
K
159 160anti-parallel
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There are 4 strands in AV sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
K
153 155first strand
Strand 2
K
145 150anti-parallel
Strand 3
K
191 197anti-parallel
Strand 4
K
205 210anti-parallel
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There are 4 strands in AW sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
3 5first strand
Strand 2
L
18 25anti-parallel
Strand 3
L
78 83anti-parallel
Strand 4
L
68 73anti-parallel
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There are 5 strands in AX sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
103 108first strand
Strand 2
L
92 100anti-parallel
Strand 3
L
34 39anti-parallel
Strand 4
L
45 52anti-parallel
Strand 5
L
57 60anti-parallel
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There are 4 strands in AY sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
103 108first strand
Strand 2
L
92 100anti-parallel
Strand 3
L
112 116anti-parallel
Strand 4
L
9 12parallel
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There are 4 strands in AZ sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
125 128first strand
Strand 2
L
144 150anti-parallel
Strand 3
L
179 185anti-parallel
Strand 4
L
169 170anti-parallel
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There are 4 strands in BA sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
125 128first strand
Strand 2
L
144 150anti-parallel
Strand 3
L
179 185anti-parallel
Strand 4
L
174 176anti-parallel
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There are 2 strands in BB sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
140 141first strand
Strand 2
L
188 189anti-parallel
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There are 3 strands in BC sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
L
156 159first strand
Strand 2
L
198 204anti-parallel
Strand 3
L
209 215anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il