Analysis of interatomic Contacts of Structural Units in PDB entry:
1FT9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FT9 entry

There are 2 chains in PDB entry 1FT9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2ALA 213
B
 PRO 2ALA 213
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 1FT9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 12Right-handed alpha
Helix 2
2
A
94 105Right-handed alpha
Helix 3
3
A
108 132Right-handed alpha
Helix 4
4
A
132 146Right-handed alpha
Helix 5
5
A
165 174Right-handed alpha
Helix 6
6
A
176 190Right-handed alpha
Helix 7
7
A
205 212Right-handed alpha
Helix 8
8
B
6 12Right-handed alpha
Helix 9
9
B
94 105Right-handed alpha
Helix 10
10
B
108 146Right-handed alpha
Helix 11
11
B
165 174Right-handed alpha
Helix 12
12
B
176 190Right-handed alpha
Helix 13
13
B
205 213Right-handed alpha
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There are 4 sheets in PDB entry 1FT9. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 28first strand
Strand 2
A
88 93anti-parallel
Strand 3
A
44 49anti-parallel
Strand 4
A
73 75anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 35first strand
Strand 2
A
81 84anti-parallel
Strand 3
A
51 58anti-parallel
Strand 4
A
61 69anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 162first strand
Strand 2
A
201 202anti-parallel
Strand 3
A
194 195anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
161 162first strand
Strand 2
B
201 202anti-parallel
Strand 3
B
194 195anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il