Analysis of interatomic Contacts of Structural Units in PDB entry:
1FVF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FVF entry

There are 2 chains in PDB entry 1FVF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2PRO 591
B
 ALA 2PRO 591
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 1FVF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 14Right-handed alpha
Helix 2
2
A
15 20Right-handed alpha
Helix 3
3
A
31 42Right-handed alpha
Helix 4
4
A
43 49Right-handed alpha
Helix 5
5
A
77 88Right-handed alpha
Helix 6
6
A
108 117Right-handed alpha
Helix 7
7
A
118 122Right-handed 310
Helix 8
8
A
148 155Right-handed alpha
Helix 9
9
A
156 159Right-handed 310
Helix 10
10
A
162 180Right-handed alpha
Helix 11
11
A
193 212Right-handed alpha
Helix 12
12
A
233 235Right-handed 310
Helix 13
13
A
245 254Right-handed alpha
Helix 14
14
A
256 258Right-handed 310
Helix 15
15
A
282 289Right-handed alpha
Helix 16
16
A
295 309Right-handed alpha
Helix 17
17
A
330 359Right-handed alpha
Helix 18
18
A
359 373Right-handed alpha
Helix 19
19
A
374 379Right-handed alpha
Helix 20
20
A
387 394Right-handed alpha
Helix 21
21
A
398 414Right-handed alpha
Helix 22
22
A
417 428Right-handed alpha
Helix 23
23
A
431 441Right-handed alpha
Helix 24
24
A
442 445Right-handed 310
Helix 25
25
A
462 466Right-handed 310
Helix 26
26
A
482 493Right-handed alpha
Helix 27
27
A
548 560Right-handed alpha
Helix 28
28
A
577 590Right-handed alpha
Helix 29
29
B
2 14Right-handed alpha
Helix 30
30
B
15 20Right-handed alpha
Helix 31
31
B
31 42Right-handed alpha
Helix 32
32
B
43 49Right-handed alpha
Helix 33
33
B
77 88Right-handed alpha
Helix 34
34
B
108 117Right-handed alpha
Helix 35
35
B
118 122Right-handed 310
Helix 36
36
B
148 155Right-handed alpha
Helix 37
37
B
156 159Right-handed 310
Helix 38
38
B
162 180Right-handed alpha
Helix 39
39
B
193 212Right-handed alpha
Helix 40
40
B
233 235Right-handed 310
Helix 41
41
B
245 254Right-handed alpha
Helix 42
42
B
256 258Right-handed 310
Helix 43
43
B
282 289Right-handed alpha
Helix 44
44
B
295 309Right-handed alpha
Helix 45
45
B
330 359Right-handed alpha
Helix 46
46
B
359 373Right-handed alpha
Helix 47
47
B
374 379Right-handed alpha
Helix 48
48
B
387 394Right-handed alpha
Helix 49
49
B
398 414Right-handed alpha
Helix 50
50
B
417 428Right-handed alpha
Helix 51
51
B
431 441Right-handed alpha
Helix 52
52
B
442 445Right-handed 310
Helix 53
53
B
462 466Right-handed 310
Helix 54
54
B
482 493Right-handed alpha
Helix 55
55
B
548 560Right-handed alpha
Helix 56
56
B
577 590Right-handed alpha
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There are 6 sheets in PDB entry 1FVF. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 57first strand
Strand 2
A
26 30parallel
Strand 3
A
69 74parallel
Strand 4
A
99 103parallel
Strand 5
A
124 129parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 138first strand
Strand 2
A
141 143anti-parallel
Strand 3
A
567 572parallel
Strand 4
A
538 544parallel
Strand 5
A
226 231parallel
Strand 6
A
185 188parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
260 262first strand
Strand 2
A
275 277anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 57first strand
Strand 2
B
26 30parallel
Strand 3
B
69 74parallel
Strand 4
B
99 103parallel
Strand 5
B
124 129parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 143first strand
Strand 2
B
567 572parallel
Strand 3
B
538 544parallel
Strand 4
B
226 231parallel
Strand 5
B
185 188parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
260 262first strand
Strand 2
B
275 277anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il