Analysis of interatomic Contacts of Structural Units in PDB entry:
1FVP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FVP entry

There are 2 chains in PDB entry 1FVP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ILE 231
B
 MET 1ILE 231
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 1FVP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 37Right-handed alpha
Helix 2
2
A
80 87Right-handed alpha
Helix 3
3
A
102 116Right-handed alpha
Helix 4
4
A
138 155Right-handed alpha
Helix 5
5
A
166 171Right-handed alpha
Helix 6
6
A
178 191Right-handed alpha
Helix 7
7
A
207 227Right-handed alpha
Helix 8
8
B
21 37Right-handed alpha
Helix 9
9
B
79 87Right-handed alpha
Helix 10
10
B
102 114Right-handed alpha
Helix 11
11
B
140 152Right-handed alpha
Helix 12
12
B
166 171Right-handed alpha
Helix 13
13
B
177 191Right-handed alpha
Helix 14
14
B
207 228Right-handed alpha
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There are 6 sheets in PDB entry 1FVP. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 11first strand
Strand 2
A
45 48parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 68first strand
Strand 2
A
71 75anti-parallel
Strand 3
A
91 93parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 130first strand
Strand 2
A
195 199parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 10first strand
Strand 2
B
44 47parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 68first strand
Strand 2
B
71 75anti-parallel
Strand 3
B
91 93parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
128 131first strand
Strand 2
B
197 200parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il