Analysis of interatomic Contacts of Structural Units in PDB entry:
1FVR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FVR entry

There are 2 chains in PDB entry 1FVR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 813GLU 1121
B
 PRO 813GLU 1121
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 1FVR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
820 824Right-handed 310
Helix 2
2
A
833 835Right-handed 310
Helix 3
3
A
867 877Right-handed alpha
Helix 4
4
A
909 916Right-handed alpha
Helix 5
5
A
918 923Right-handed alpha
Helix 6
6
A
923 930Right-handed alpha
Helix 7
7
A
937 958Right-handed alpha
Helix 8
8
A
966 968Right-handed 310
Helix 9
9
A
974 976Right-handed 310
Helix 10
10
A
1006 1013Right-handed alpha
Helix 11
11
A
1016 1033Right-handed alpha
Helix 12
12
A
1043 1051Right-handed alpha
Helix 13
13
A
1052 1054Right-handed 310
Helix 14
14
A
1064 1075Right-handed alpha
Helix 15
15
A
1078 1082Right-handed 310
Helix 16
16
A
1084 1098Right-handed alpha
Helix 17
17
A
1117 1121Right-handed 310
Helix 18
18
B
820 824Right-handed 310
Helix 19
19
B
833 835Right-handed 310
Helix 20
20
B
867 878Right-handed alpha
Helix 21
21
B
909 917Right-handed alpha
Helix 22
22
B
918 923Right-handed alpha
Helix 23
23
B
923 930Right-handed alpha
Helix 24
24
B
937 957Right-handed alpha
Helix 25
25
B
966 968Right-handed 310
Helix 26
26
B
974 976Right-handed 310
Helix 27
27
B
1001 1005Right-handed 310
Helix 28
28
B
1006 1013Right-handed alpha
Helix 29
29
B
1016 1033Right-handed alpha
Helix 30
30
B
1043 1051Right-handed alpha
Helix 31
31
B
1052 1054Right-handed 310
Helix 32
32
B
1064 1075Right-handed alpha
Helix 33
33
B
1078 1082Right-handed 310
Helix 34
34
B
1084 1098Right-handed alpha
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There are 8 sheets in PDB entry 1FVR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
825 831first strand
Strand 2
A
837 845anti-parallel
Strand 3
A
848 858anti-parallel
Strand 4
A
897 902anti-parallel
Strand 5
A
888 894anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
960 961first strand
Strand 2
A
986 987anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
970 972first strand
Strand 2
A
978 980anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
991 992first strand
Strand 2
A
1014 1015anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
825 831first strand
Strand 2
B
837 845anti-parallel
Strand 3
B
848 858anti-parallel
Strand 4
B
897 902anti-parallel
Strand 5
B
888 894anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
960 961first strand
Strand 2
B
986 987anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
970 972first strand
Strand 2
B
978 980anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
991 992first strand
Strand 2
B
1014 1015anti-parallel
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