Analysis of interatomic Contacts of Structural Units in PDB entry:
1FVU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FVU entry

There are 4 chains in PDB entry 1FVU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 1PRO 133
B
 ASP 401ALA 525
C
 ASP 201PRO 333
D
 ASP 601ALA 725
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 1FVU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 34Right-handed alpha
Helix 2
2
A
47 60Right-handed alpha
Helix 3
3
A
96 100Right-handed 310
Helix 4
4
B
422 434Right-handed alpha
Helix 5
5
B
444 453Right-handed alpha
Helix 6
6
C
222 234Right-handed alpha
Helix 7
7
C
247 258Right-handed alpha
Helix 8
8
C
296 300Right-handed 310
Helix 9
9
D
622 632Right-handed alpha
Helix 10
10
D
644 653Right-handed alpha
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There are 8 sheets in PDB entry 1FVU. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 9first strand
Strand 2
A
12 21anti-parallel
Strand 3
A
124 130anti-parallel
Strand 4
A
38 39anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 118first strand
Strand 2
A
103 107anti-parallel
Strand 3
A
66 73anti-parallel
Strand 4
B
477 479anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
407 409first strand
Strand 2
B
412 421anti-parallel
Strand 3
B
517 523anti-parallel
Strand 4
B
438 439anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
407 409first strand
Strand 2
B
412 421anti-parallel
Strand 3
B
517 523anti-parallel
Strand 4
B
464 465parallel
Strand 5
B
497 502anti-parallel
Strand 6
B
507 512anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
207 209first strand
Strand 2
C
212 221anti-parallel
Strand 3
C
324 330anti-parallel
Strand 4
C
238 239anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
315 318first strand
Strand 2
C
303 307anti-parallel
Strand 3
C
266 273anti-parallel
Strand 4
D
677 679anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
607 609first strand
Strand 2
D
612 621anti-parallel
Strand 3
D
717 724anti-parallel
Strand 4
D
638 639anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
607 609first strand
Strand 2
D
612 621anti-parallel
Strand 3
D
717 724anti-parallel
Strand 4
D
664 669parallel
Strand 5
D
697 702anti-parallel
Strand 6
D
707 712anti-parallel
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