Analysis of interatomic Contacts of Structural Units in PDB entry:
1FX3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FX3 entry

There are 4 chains in PDB entry 1FX3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 15ASN 157
B
 GLN 15GLU 163
C
 GLN 15GLU 156
D
 VAL 17ASN 151
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 1FX3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 39Right-handed alpha
Helix 2
2
A
99 109Right-handed alpha
Helix 3
3
A
109 130Right-handed alpha
Helix 4
4
A
141 157Right-handed alpha
Helix 5
5
B
36 41Right-handed 310
Helix 6
6
B
99 109Right-handed alpha
Helix 7
7
B
109 130Right-handed alpha
Helix 8
8
B
141 162Right-handed alpha
Helix 9
9
C
36 41Right-handed 310
Helix 10
10
C
99 109Right-handed alpha
Helix 11
11
C
109 130Right-handed alpha
Helix 12
12
C
141 154Right-handed alpha
Helix 13
13
D
99 109Right-handed alpha
Helix 14
14
D
109 128Right-handed alpha
Helix 15
15
D
141 148Right-handed alpha
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There are 4 sheets in PDB entry 1FX3. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 59first strand
Strand 2
A
62 71anti-parallel
Strand 3
A
84 96anti-parallel
Strand 4
A
17 31anti-parallel
Strand 5
B
17 31anti-parallel
Strand 6
B
81 96anti-parallel
Strand 7
B
62 75anti-parallel
Strand 8
B
45 59anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
17 20first strand
Strand 2
C
93 96anti-parallel
Strand 3
C
62 63anti-parallel
Strand 4
C
57 59anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
45 54first strand
Strand 2
C
66 75anti-parallel
Strand 3
C
81 90anti-parallel
Strand 4
C
24 31anti-parallel
Strand 5
D
18 31anti-parallel
Strand 6
D
81 95anti-parallel
Strand 7
D
62 75anti-parallel
Strand 8
D
45 46anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
45 54first strand
Strand 2
C
66 75anti-parallel
Strand 3
C
81 90anti-parallel
Strand 4
C
24 31anti-parallel
Strand 5
D
18 31anti-parallel
Strand 6
D
81 95anti-parallel
Strand 7
D
62 75anti-parallel
Strand 8
D
49 59anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il