Analysis of interatomic Contacts of Structural Units in PDB entry:
1FY7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FY7 entry

There is 1 chain in PDB entry 1FY7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 162PRO 434
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 1FY7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
207 216Right-handed alpha
Helix 2
2
A
244 257Right-handed alpha
Helix 3
3
A
309 312Right-handed 310
Helix 4
4
A
315 331Right-handed alpha
Helix 5
5
A
342 364Right-handed alpha
Helix 6
6
A
370 378Right-handed alpha
Helix 7
7
A
380 392Right-handed alpha
Helix 8
8
A
406 419Right-handed alpha
Helix 9
9
A
425 428Right-handed 310
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There are 4 sheets in PDB entry 1FY7. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 177first strand
Strand 2
A
169 172anti-parallel
Strand 3
A
194 197parallel
Strand 4
A
204 205anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
226 230first strand
Strand 2
A
234 240anti-parallel
Strand 3
A
271 280anti-parallel
Strand 4
A
283 293anti-parallel
Strand 5
A
305 307anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 302first strand
Strand 2
A
336 337parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
367 369first strand
Strand 2
A
400 404anti-parallel
Strand 3
A
394 397anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il