Analysis of interatomic Contacts of Structural Units in PDB entry:
1FYH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FYH entry

There are 4 chains in PDB entry 1FYH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 0ALA 324
B
 VAL 12ASN 223
D
 MET 0ALA 324
E
 VAL 12PHE 222
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 1FYH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 16Right-handed alpha
Helix 2
2
A
19 24Right-handed 310
Helix 3
3
A
29 36Right-handed alpha
Helix 4
4
A
38 59Right-handed alpha
Helix 5
5
A
63 65Right-handed 310
Helix 6
6
A
66 83Right-handed alpha
Helix 7
7
A
85 97Right-handed alpha
Helix 8
8
A
102 120Right-handed alpha
Helix 9
9
A
201 216Right-handed alpha
Helix 10
10
A
229 236Right-handed alpha
Helix 11
11
A
238 259Right-handed alpha
Helix 12
12
A
266 282Right-handed alpha
Helix 13
13
A
285 297Right-handed alpha
Helix 14
14
A
302 318Right-handed alpha
Helix 15
15
B
71 74Right-handed 310
Helix 16
16
B
103 108Right-handed alpha
Helix 17
17
B
131 135Right-handed 310
Helix 18
18
D
3 15Right-handed alpha
Helix 19
19
D
19 24Right-handed 310
Helix 20
20
D
29 36Right-handed alpha
Helix 21
21
D
38 59Right-handed alpha
Helix 22
22
D
63 65Right-handed 310
Helix 23
23
D
66 83Right-handed alpha
Helix 24
24
D
85 98Right-handed alpha
Helix 25
25
D
102 120Right-handed alpha
Helix 26
26
D
201 216Right-handed alpha
Helix 27
27
D
229 236Right-handed alpha
Helix 28
28
D
238 260Right-handed alpha
Helix 29
29
D
266 282Right-handed alpha
Helix 30
30
D
285 297Right-handed alpha
Helix 31
31
D
302 318Right-handed alpha
Helix 32
32
E
71 74Right-handed 310
Helix 33
33
E
103 108Right-handed alpha
Helix 34
34
E
131 135Right-handed 310
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There are 10 sheets in PDB entry 1FYH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 21first strand
Strand 2
B
28 32anti-parallel
Strand 3
B
67 69anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 63first strand
Strand 2
B
41 48anti-parallel
Strand 3
B
81 89anti-parallel
Strand 4
B
92 93anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 63first strand
Strand 2
B
41 48anti-parallel
Strand 3
B
81 89anti-parallel
Strand 4
B
97 98anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
114 119first strand
Strand 2
B
123 129anti-parallel
Strand 3
B
182 188anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
164 171first strand
Strand 2
B
152 161anti-parallel
Strand 3
B
195 204anti-parallel
Strand 4
B
217 220anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
16 21first strand
Strand 2
E
28 32anti-parallel
Strand 3
E
67 69anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
57 63first strand
Strand 2
E
41 48anti-parallel
Strand 3
E
81 89anti-parallel
Strand 4
E
92 93anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
57 63first strand
Strand 2
E
41 48anti-parallel
Strand 3
E
81 89anti-parallel
Strand 4
E
97 98anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
114 119first strand
Strand 2
E
123 129anti-parallel
Strand 3
E
182 188anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
164 171first strand
Strand 2
E
152 161anti-parallel
Strand 3
E
195 204anti-parallel
Strand 4
E
217 220anti-parallel
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