Analysis of interatomic Contacts of Structural Units in PDB entry:
1FZ8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FZ8 entry

There are 6 chains in PDB entry 1FZ8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 17ASN 527
B
ARG 18ASN 527
C
SER 2LYS 389
D
SER 2LYS 389
E
LYS 3PRO 169
F
LYS 3HIS 170
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are119 helices in PDB entry 1FZ8. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
24 30Right-handed alpha
Helix 2
2
A
31 36Right-handed 310
Helix 3
3
A
63 84Right-handed alpha
Helix 4
4
A
84 89Right-handed alpha
Helix 5
5
A
96 128Right-handed alpha
Helix 6
6
A
130 162Right-handed alpha
Helix 7
7
A
170 175Right-handed alpha
Helix 8
8
A
176 178Right-handed 310
Helix 9
9
A
179 189Right-handed alpha
Helix 10
10
A
189 194Right-handed alpha
Helix 11
11
A
196 205Right-handed alpha
Helix 12
12
A
207 212Right-handed alpha
Helix 13
13
A
212 227Right-handed alpha
Helix 14
14
A
230 241Right-handed alpha
Helix 15
15
A
242 257Right-handed alpha
Helix 16
16
A
260 293Right-handed alpha
Helix 17
17
A
300 310Right-handed alpha
Helix 18
18
A
315 321Right-handed alpha
Helix 19
19
A
322 325Right-handed 310
Helix 20
20
A
331 340Right-handed alpha
Helix 21
21
A
341 353Right-handed alpha
Helix 22
22
A
354 357Right-handed 310
Helix 23
23
A
365 376Right-handed alpha
Helix 24
24
A
378 393Right-handed alpha
Helix 25
25
A
397 401Right-handed 310
Helix 26
26
A
403 411Right-handed alpha
Helix 27
27
A
450 460Right-handed alpha
Helix 28
28
A
461 464Right-handed 310
Helix 29
29
A
468 474Right-handed alpha
Helix 30
30
A
477 485Right-handed alpha
Helix 31
31
A
508 514Right-handed alpha
Helix 32
32
A
521 526Right-handed 310
Helix 33
33
B
24 30Right-handed alpha
Helix 34
34
B
31 36Right-handed 310
Helix 35
35
B
63 84Right-handed alpha
Helix 36
36
B
84 89Right-handed alpha
Helix 37
37
B
96 128Right-handed alpha
Helix 38
38
B
130 162Right-handed alpha
Helix 39
39
B
170 175Right-handed alpha
Helix 40
40
B
179 189Right-handed alpha
Helix 41
41
B
189 194Right-handed alpha
Helix 42
42
B
196 205Right-handed alpha
Helix 43
43
B
207 212Right-handed alpha
Helix 44
44
B
212 227Right-handed alpha
Helix 45
45
B
230 241Right-handed alpha
Helix 46
46
B
242 258Right-handed alpha
Helix 47
47
B
260 293Right-handed alpha
Helix 48
48
B
300 310Right-handed alpha
Helix 49
49
B
315 321Right-handed alpha
Helix 50
50
B
322 325Right-handed 310
Helix 51
51
B
331 340Right-handed alpha
Helix 52
52
B
341 353Right-handed alpha
Helix 53
53
B
354 357Right-handed 310
Helix 54
54
B
365 376Right-handed alpha
Helix 55
55
B
378 393Right-handed alpha
Helix 56
56
B
404 411Right-handed alpha
Helix 57
57
B
450 460Right-handed alpha
Helix 58
58
B
468 473Right-handed alpha
Helix 59
59
B
477 485Right-handed alpha
Helix 60
60
B
508 514Right-handed alpha
Helix 61
61
B
521 527Right-handed 310
Helix 62
62
C
13 24Right-handed alpha
Helix 63
63
C
47 54Right-handed alpha
Helix 64
64
C
84 88Right-handed 310
Helix 65
65
C
105 130Right-handed alpha
Helix 66
66
C
131 136Right-handed 310
Helix 67
67
C
137 144Right-handed alpha
Helix 68
68
C
147 162Right-handed alpha
Helix 69
69
C
163 170Right-handed alpha
Helix 70
70
C
172 204Right-handed alpha
Helix 71
71
C
211 221Right-handed alpha
Helix 72
72
C
224 237Right-handed alpha
Helix 73
73
C
240 251Right-handed alpha
Helix 74
74
C
251 263Right-handed alpha
Helix 75
75
C
264 269Right-handed alpha
Helix 76
76
C
270 273Right-handed 310
Helix 77
77
C
275 300Right-handed alpha
Helix 78
78
C
309 336Right-handed alpha
Helix 79
79
C
337 342Right-handed 310
Helix 80
80
C
348 367Right-handed alpha
Helix 81
81
C
368 372Right-handed 310
Helix 82
82
C
376 386Right-handed alpha
Helix 83
83
D
13 24Right-handed alpha
Helix 84
84
D
47 54Right-handed alpha
Helix 85
85
D
84 88Right-handed 310
Helix 86
86
D
105 130Right-handed alpha
Helix 87
87
D
131 136Right-handed 310
Helix 88
88
D
137 143Right-handed alpha
Helix 89
89
D
147 162Right-handed alpha
Helix 90
90
D
163 170Right-handed alpha
Helix 91
91
D
172 204Right-handed alpha
Helix 92
92
D
211 221Right-handed alpha
Helix 93
93
D
224 237Right-handed alpha
Helix 94
94
D
240 250Right-handed alpha
Helix 95
95
D
251 263Right-handed alpha
Helix 96
96
D
264 269Right-handed alpha
Helix 97
97
D
270 273Right-handed 310
Helix 98
98
D
275 300Right-handed alpha
Helix 99
99
D
309 336Right-handed alpha
Helix 100
100
D
337 342Right-handed 310
Helix 101
101
D
348 367Right-handed alpha
Helix 102
102
D
368 371Right-handed 310
Helix 103
103
D
376 386Right-handed alpha
Helix 104
104
E
9 21Right-handed alpha
Helix 105
105
E
24 40Right-handed alpha
Helix 106
106
E
52 72Right-handed alpha
Helix 107
107
E
73 80Right-handed alpha
Helix 108
108
E
86 101Right-handed alpha
Helix 109
109
E
103 119Right-handed alpha
Helix 110
110
E
124 144Right-handed alpha
Helix 111
111
E
151 160Right-handed alpha
Helix 112
112
F
9 20Right-handed alpha
Helix 113
113
F
24 40Right-handed alpha
Helix 114
114
F
52 72Right-handed alpha
Helix 115
115
F
73 80Right-handed alpha
Helix 116
116
F
86 101Right-handed alpha
Helix 117
117
F
103 119Right-handed alpha
Helix 118
118
F
124 144Right-handed alpha
Helix 119
119
F
151 160Right-handed alpha
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There are 4 sheets in PDB entry 1FZ8. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
416 417first strand
Strand 2
A
424 425anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
444 448first strand
Strand 2
A
436 441anti-parallel
Strand 3
E
162 167anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
416 417first strand
Strand 2
B
424 425anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
444 448first strand
Strand 2
B
436 441anti-parallel
Strand 3
F
162 167anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il