Analysis of interatomic Contacts of Structural Units in PDB entry:
1FZA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1FZA entry

There are 6 chains in PDB entry 1FZA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 111PRO 195
B
 LYS 148GLN 460
C
 LYS 88GLU 396
D
 VAL 111PRO 195
E
 LYS 148GLN 460
F
 LYS 88GLU 396
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 38 helices in PDB entry 1FZA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
117 163Right-handed alpha
Helix 2
2
A
176 188Right-handed alpha
Helix 3
3
B
155 159Right-handed alpha
Helix 4
4
B
163 194Right-handed alpha
Helix 5
5
B
211 217Right-handed alpha
Helix 6
6
B
266 271Right-handed alpha
Helix 7
7
B
296 303Right-handed alpha
Helix 8
8
B
334 336Right-handed 310
Helix 9
9
B
352 355Right-handed alpha
Helix 10
10
B
365 367Right-handed 310
Helix 11
11
B
438 441Right-handed alpha
Helix 12
12
C
93 134Right-handed alpha
Helix 13
13
C
153 159Right-handed alpha
Helix 14
14
C
208 213Right-handed alpha
Helix 15
15
C
230 237Right-handed alpha
Helix 16
16
C
239 241Right-handed 310
Helix 17
17
C
289 291Right-handed 310
Helix 18
18
C
301 305Right-handed alpha
Helix 19
19
C
326 330Right-handed alpha
Helix 20
20
D
117 163Right-handed alpha
Helix 21
21
D
176 188Right-handed alpha
Helix 22
22
E
155 159Right-handed alpha
Helix 23
23
E
163 194Right-handed alpha
Helix 24
24
E
211 217Right-handed alpha
Helix 25
25
E
266 271Right-handed alpha
Helix 26
26
E
296 303Right-handed alpha
Helix 27
27
E
334 336Right-handed 310
Helix 28
28
E
352 355Right-handed alpha
Helix 29
29
E
365 367Right-handed 310
Helix 30
30
E
438 441Right-handed alpha
Helix 31
31
F
93 134Right-handed alpha
Helix 32
32
F
153 159Right-handed alpha
Helix 33
33
F
208 213Right-handed alpha
Helix 34
34
F
230 237Right-handed alpha
Helix 35
35
F
239 241Right-handed 310
Helix 36
36
F
289 291Right-handed 310
Helix 37
37
F
301 305Right-handed alpha
Helix 38
38
F
326 330Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 1FZA. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
223 227first strand
Strand 2
B
236 240anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
321 326first strand
Strand 2
B
309 315anti-parallel
Strand 3
B
449 455anti-parallel
Strand 4
B
250 255anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
165 169first strand
Strand 2
C
178 185anti-parallel
Strand 3
C
189 197anti-parallel
Strand 4
C
381 388anti-parallel
Strand 5
C
244 251anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
261 263first strand
Strand 2
C
280 282anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
223 227first strand
Strand 2
E
236 240anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
321 326first strand
Strand 2
E
309 315anti-parallel
Strand 3
E
449 455anti-parallel
Strand 4
E
250 255anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
165 169first strand
Strand 2
F
178 185anti-parallel
Strand 3
F
189 197anti-parallel
Strand 4
F
381 388anti-parallel
Strand 5
F
244 251anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
261 263first strand
Strand 2
F
280 282anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il