Analysis of interatomic Contacts of Structural Units in PDB entry:
1G01


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1G01 entry

There is 1 chain in PDB entry 1G01 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 223THR 579
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 1G01. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
231 236Right-handed alpha
Helix 2
2
A
266 271Right-handed alpha
Helix 3
3
A
272 274Right-handed 310
Helix 4
4
A
275 284Right-handed alpha
Helix 5
5
A
307 322Right-handed alpha
Helix 6
6
A
340 344Right-handed 310
Helix 7
7
A
345 358Right-handed alpha
Helix 8
8
A
362 364Right-handed 310
Helix 9
9
A
387 409Right-handed alpha
Helix 10
10
A
417 422Right-handed alpha
Helix 11
11
A
423 430Right-handed alpha
Helix 12
12
A
460 464Right-handed 310
Helix 13
13
A
466 477Right-handed alpha
Helix 14
14
A
498 512Right-handed alpha
Helix 15
15
A
553 556Right-handed 310
Helix 16
16
A
558 570Right-handed alpha
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There are 2 sheets in PDB entry 1G01. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 243first strand
Strand 2
A
246 250anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
260 264first strand
Strand 2
A
290 296parallel
Strand 3
A
325 331parallel
Strand 4
A
366 369parallel
Strand 5
A
413 415parallel
Strand 6
A
437 444parallel
Strand 7
A
481 487parallel
Strand 8
A
516 521parallel
Strand 9
A
260 264parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il