Analysis of interatomic Contacts of Structural Units in PDB entry:
1G0R

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1G0R entry

There are 5 chains in PDB entry 1G0R (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 2	TYR 293
B	LYS 2	TYR 293
C	LYS 2	TYR 293
D	LYS 2	TYR 293
E	LYS 2	PRO 85

There are133 helices in PDB entry 1G0R. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	13	17	Right-handed 310
Helix 2	2	A	18	23	Right-handed alpha
Helix 3	3	A	24	27	Right-handed 310
Helix 4	4	A	36	46	Right-handed alpha
Helix 5	5	A	59	68	Right-handed alpha
Helix 6	6	A	70	74	Right-handed 310
Helix 7	7	A	89	95	Right-handed alpha
Helix 8	8	A	95	100	Right-handed alpha
Helix 9	9	A	117	128	Right-handed alpha
Helix 10	10	A	141	144	Right-handed 310
Helix 11	11	A	181	188	Right-handed alpha
Helix 12	12	A	198	209	Right-handed alpha
Helix 13	13	A	228	247	Right-handed alpha
Helix 14	14	A	252	260	Right-handed alpha
Helix 15	15	A	264	273	Right-handed alpha
Helix 16	16	A	274	276	Right-handed 310
Helix 17	17	A	278	287	Right-handed alpha
Helix 18	18	B	18	22	Right-handed 310
Helix 19	19	B	36	46	Right-handed alpha
Helix 20	20	B	59	68	Right-handed alpha
Helix 21	21	B	70	74	Right-handed 310
Helix 22	22	B	89	95	Right-handed alpha
Helix 23	23	B	95	100	Right-handed alpha
Helix 24	24	B	117	127	Right-handed alpha
Helix 25	25	B	141	144	Right-handed 310
Helix 26	26	B	181	188	Right-handed alpha
Helix 27	27	B	198	209	Right-handed alpha
Helix 28	28	B	228	247	Right-handed alpha
Helix 29	29	B	252	260	Right-handed alpha
Helix 30	30	B	264	273	Right-handed alpha
Helix 31	31	B	274	276	Right-handed 310
Helix 32	32	B	278	287	Right-handed alpha
Helix 33	33	C	18	23	Right-handed alpha
Helix 34	34	C	24	27	Right-handed 310
Helix 35	35	C	36	46	Right-handed alpha
Helix 36	36	C	59	68	Right-handed alpha
Helix 37	37	C	70	74	Right-handed 310
Helix 38	38	C	87	89	Right-handed 310
Helix 39	39	C	90	95	Right-handed alpha
Helix 40	40	C	95	100	Right-handed alpha
Helix 41	41	C	117	128	Right-handed alpha
Helix 42	42	C	141	144	Right-handed 310
Helix 43	43	C	181	189	Right-handed alpha
Helix 44	44	C	198	208	Right-handed alpha
Helix 45	45	C	228	247	Right-handed alpha
Helix 46	46	C	252	260	Right-handed alpha
Helix 47	47	C	264	273	Right-handed alpha
Helix 48	48	C	274	276	Right-handed 310
Helix 49	49	C	278	288	Right-handed alpha
Helix 50	50	D	24	27	Right-handed 310
Helix 51	51	D	36	46	Right-handed alpha
Helix 52	52	D	59	68	Right-handed alpha
Helix 53	53	D	70	74	Right-handed 310
Helix 54	54	D	89	95	Right-handed alpha
Helix 55	55	D	95	100	Right-handed alpha
Helix 56	56	D	117	128	Right-handed alpha
Helix 57	57	D	141	144	Right-handed 310
Helix 58	58	D	181	189	Right-handed alpha
Helix 59	59	D	198	208	Right-handed alpha
Helix 60	60	D	228	247	Right-handed alpha
Helix 61	61	D	252	260	Right-handed alpha
Helix 62	62	D	264	273	Right-handed alpha
Helix 63	63	D	274	276	Right-handed 310
Helix 64	64	D	278	290	Right-handed alpha
Helix 65	65	E	13	17	Right-handed 310
Helix 66	66	E	24	27	Right-handed 310
Helix 67	67	E	36	46	Right-handed alpha
Helix 68	68	E	59	68	Right-handed alpha
Helix 69	69	E	70	74	Right-handed 310
Helix 70	70	E	87	89	Right-handed 310
Helix 71	71	E	90	95	Right-handed alpha
Helix 72	72	E	95	100	Right-handed alpha
Helix 73	73	E	117	128	Right-handed alpha
Helix 74	74	E	141	144	Right-handed 310
Helix 75	75	E	181	188	Right-handed alpha
Helix 76	76	E	198	208	Right-handed alpha
Helix 77	77	E	228	247	Right-handed alpha
Helix 78	78	E	252	260	Right-handed alpha
Helix 79	79	E	264	273	Right-handed alpha
Helix 80	80	E	274	276	Right-handed 310
Helix 81	81	E	278	288	Right-handed alpha
Helix 82	82	F	13	17	Right-handed 310
Helix 83	83	F	18	22	Right-handed 310
Helix 84	84	F	24	27	Right-handed 310
Helix 85	85	F	36	46	Right-handed alpha
Helix 86	86	F	59	68	Right-handed alpha
Helix 87	87	F	70	74	Right-handed 310
Helix 88	88	F	89	95	Right-handed alpha
Helix 89	89	F	95	100	Right-handed alpha
Helix 90	90	F	117	128	Right-handed alpha
Helix 91	91	F	141	144	Right-handed 310
Helix 92	92	F	181	188	Right-handed alpha
Helix 93	93	F	198	208	Right-handed alpha
Helix 94	94	F	228	247	Right-handed alpha
Helix 95	95	F	252	260	Right-handed alpha
Helix 96	96	F	264	273	Right-handed alpha
Helix 97	97	F	274	276	Right-handed 310
Helix 98	98	F	278	287	Right-handed alpha
Helix 99	99	G	13	17	Right-handed 310
Helix 100	100	G	18	23	Right-handed alpha
Helix 101	101	G	36	46	Right-handed alpha
Helix 102	102	G	59	68	Right-handed alpha
Helix 103	103	G	70	74	Right-handed 310
Helix 104	104	G	87	89	Right-handed 310
Helix 105	105	G	90	95	Right-handed alpha
Helix 106	106	G	95	100	Right-handed alpha
Helix 107	107	G	117	127	Right-handed alpha
Helix 108	108	G	141	144	Right-handed 310
Helix 109	109	G	181	188	Right-handed alpha
Helix 110	110	G	198	209	Right-handed alpha
Helix 111	111	G	228	247	Right-handed alpha
Helix 112	112	G	252	260	Right-handed alpha
Helix 113	113	G	264	273	Right-handed alpha
Helix 114	114	G	274	276	Right-handed 310
Helix 115	115	G	278	287	Right-handed alpha
Helix 116	116	G	288	290	Right-handed 310
Helix 117	117	H	13	17	Right-handed 310
Helix 118	118	H	24	27	Right-handed 310
Helix 119	119	H	36	46	Right-handed alpha
Helix 120	120	H	59	68	Right-handed alpha
Helix 121	121	H	70	74	Right-handed 310
Helix 122	122	H	87	89	Right-handed 310
Helix 123	123	H	90	95	Right-handed alpha
Helix 124	124	H	95	100	Right-handed alpha
Helix 125	125	H	117	128	Right-handed alpha
Helix 126	126	H	141	144	Right-handed 310
Helix 127	127	H	181	188	Right-handed alpha
Helix 128	128	H	198	209	Right-handed alpha
Helix 129	129	H	228	247	Right-handed alpha
Helix 130	130	H	252	260	Right-handed alpha
Helix 131	131	H	264	273	Right-handed alpha
Helix 132	132	H	274	276	Right-handed 310
Helix 133	133	H	278	287	Right-handed alpha

There are 35 sheets in PDB entry 1G0R. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	212	216	first strand
Strand 2	A	132	138	parallel
Strand 3	A	170	172	anti-parallel

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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	212	216	first strand
Strand 2	A	132	138	parallel
Strand 3	A	175	178	anti-parallel
Strand 4	A	103	108	anti-parallel
Strand 5	A	3	8	parallel
Strand 6	A	50	55	parallel
Strand 7	A	76	81	parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	30	first strand
Strand 2	A	33	34	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	111	114	first strand
Strand 2	A	222	225	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	146	150	first strand
Strand 2	A	156	161	anti-parallel

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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	76	81	first strand
Strand 2	B	50	55	parallel
Strand 3	B	3	8	parallel
Strand 4	B	103	108	parallel
Strand 5	B	170	178	anti-parallel
Strand 6	B	132	138	anti-parallel
Strand 7	B	212	216	parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	30	first strand
Strand 2	B	33	34	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	111	114	first strand
Strand 2	B	222	225	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	150	first strand
Strand 2	B	156	161	anti-parallel

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There are 7 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	76	81	first strand
Strand 2	C	50	55	parallel
Strand 3	C	3	8	parallel
Strand 4	C	103	108	parallel
Strand 5	C	170	178	anti-parallel
Strand 6	C	132	138	anti-parallel
Strand 7	C	212	216	parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	30	first strand
Strand 2	C	33	34	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	111	114	first strand
Strand 2	C	222	225	anti-parallel

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There are 2 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	146	150	first strand
Strand 2	C	156	161	anti-parallel

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There are 7 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	76	81	first strand
Strand 2	D	50	55	parallel
Strand 3	D	3	8	parallel
Strand 4	D	103	108	parallel
Strand 5	D	170	178	anti-parallel
Strand 6	D	132	138	anti-parallel
Strand 7	D	212	216	parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	29	30	first strand
Strand 2	D	33	34	anti-parallel

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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	111	114	first strand
Strand 2	D	222	225	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	146	150	first strand
Strand 2	D	156	161	anti-parallel

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There are 3 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	212	216	first strand
Strand 2	E	132	138	parallel
Strand 3	E	170	172	anti-parallel

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There are 7 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	212	216	first strand
Strand 2	E	132	138	parallel
Strand 3	E	175	178	anti-parallel
Strand 4	E	103	108	anti-parallel
Strand 5	E	3	8	parallel
Strand 6	E	50	55	parallel
Strand 7	E	76	81	parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	29	30	first strand
Strand 2	E	33	34	anti-parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	111	114	first strand
Strand 2	E	222	225	anti-parallel

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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	146	150	first strand
Strand 2	E	156	161	anti-parallel

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There are 7 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	76	81	first strand
Strand 2	F	50	55	parallel
Strand 3	F	3	9	parallel
Strand 4	F	103	108	parallel
Strand 5	F	170	178	anti-parallel
Strand 6	F	132	138	anti-parallel
Strand 7	F	212	216	parallel

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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	29	30	first strand
Strand 2	F	33	34	anti-parallel

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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	111	114	first strand
Strand 2	F	222	225	anti-parallel

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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	146	150	first strand
Strand 2	F	156	161	anti-parallel

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There are 3 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	212	216	first strand
Strand 2	G	132	138	parallel
Strand 3	G	170	172	anti-parallel

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There are 7 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	212	216	first strand
Strand 2	G	132	138	parallel
Strand 3	G	175	178	anti-parallel
Strand 4	G	103	108	anti-parallel
Strand 5	G	3	8	parallel
Strand 6	G	50	55	parallel
Strand 7	G	76	81	parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	29	30	first strand
Strand 2	G	33	34	anti-parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	111	114	first strand
Strand 2	G	222	225	anti-parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	146	150	first strand
Strand 2	G	156	161	anti-parallel

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There are 7 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	76	81	first strand
Strand 2	H	50	55	parallel
Strand 3	H	3	8	parallel
Strand 4	H	103	108	parallel
Strand 5	H	170	178	anti-parallel
Strand 6	H	132	138	anti-parallel
Strand 7	H	212	216	parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	29	30	first strand
Strand 2	H	33	34	anti-parallel

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There are 2 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	111	114	first strand
Strand 2	H	222	225	anti-parallel

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There are 2 strands in AI sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	146	150	first strand
Strand 2	H	156	161	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1G0R

Analysis of interatomic Contacts of Structural Units in PDB entry:
1G0R