Analysis of interatomic Contacts of Structural Units in PDB entry:
1G13


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1G13 entry

There are 3 chains in PDB entry 1G13 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1ILE 162
B
 SER 1ILE 162
C
 SER 1ILE 162
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 1G13. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
79 88Right-handed alpha
Helix 2
2
A
129 134Right-handed alpha
Helix 3
3
B
9 13Right-handed 310
Helix 4
4
B
79 88Right-handed alpha
Helix 5
5
B
129 134Right-handed alpha
Helix 6
6
C
79 88Right-handed alpha
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There are 6 sheets in PDB entry 1G13. Click on sheet of interest to get list of strands forming it: A1, A2, A3, A4, A5, A6,

There are 3 strands in A1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 23first strand
Strand 2
A
32 41anti-parallel
Strand 3
A
112 122anti-parallel
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There are 9 strands in A2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 77first strand
Strand 2
A
50 59anti-parallel
Strand 3
A
62 66anti-parallel
Strand 4
A
50 59anti-parallel
Strand 5
A
135 145anti-parallel
Strand 6
A
148 161anti-parallel
Strand 7
A
28 29parallel
Strand 8
A
148 161parallel
Strand 9
A
4 7anti-parallel
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There are 3 strands in A3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
15 23first strand
Strand 2
B
32 41anti-parallel
Strand 3
B
112 122anti-parallel
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There are 9 strands in A4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 77first strand
Strand 2
B
50 59anti-parallel
Strand 3
B
62 65anti-parallel
Strand 4
B
50 59anti-parallel
Strand 5
B
135 145anti-parallel
Strand 6
B
148 161anti-parallel
Strand 7
B
4 7anti-parallel
Strand 8
B
148 161anti-parallel
Strand 9
B
28 29parallel
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There are 3 strands in A5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
15 23first strand
Strand 2
C
32 41anti-parallel
Strand 3
C
112 122anti-parallel
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There are 7 strands in A6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 7first strand
Strand 2
C
148 159anti-parallel
Strand 3
C
135 145anti-parallel
Strand 4
C
50 59anti-parallel
Strand 5
C
62 65anti-parallel
Strand 6
C
50 59anti-parallel
Strand 7
C
76 77anti-parallel
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