Analysis of interatomic Contacts of Structural Units in PDB entry:
1G1L

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1G1L entry

There are 5 chains in PDB entry 1G1L (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 2	TYR 293
B	MET 1	TYR 293
C	LYS 2	TYR 293
D	LYS 2	TYR 293
E	LYS 2	PRO 83

There are139 helices in PDB entry 1G1L. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	13	17	Right-handed 310
Helix 2	2	A	18	23	Right-handed alpha
Helix 3	3	A	24	27	Right-handed 310
Helix 4	4	A	36	46	Right-handed alpha
Helix 5	5	A	59	68	Right-handed alpha
Helix 6	6	A	70	74	Right-handed 310
Helix 7	7	A	87	89	Right-handed 310
Helix 8	8	A	90	95	Right-handed alpha
Helix 9	9	A	95	100	Right-handed alpha
Helix 10	10	A	117	127	Right-handed alpha
Helix 11	11	A	141	144	Right-handed 310
Helix 12	12	A	181	188	Right-handed alpha
Helix 13	13	A	198	209	Right-handed alpha
Helix 14	14	A	228	247	Right-handed alpha
Helix 15	15	A	252	260	Right-handed alpha
Helix 16	16	A	264	273	Right-handed alpha
Helix 17	17	A	274	276	Right-handed 310
Helix 18	18	A	278	287	Right-handed alpha
Helix 19	19	B	13	17	Right-handed 310
Helix 20	20	B	18	23	Right-handed alpha
Helix 21	21	B	24	27	Right-handed 310
Helix 22	22	B	36	46	Right-handed alpha
Helix 23	23	B	59	68	Right-handed alpha
Helix 24	24	B	70	74	Right-handed 310
Helix 25	25	B	87	89	Right-handed 310
Helix 26	26	B	90	95	Right-handed alpha
Helix 27	27	B	95	100	Right-handed alpha
Helix 28	28	B	117	128	Right-handed alpha
Helix 29	29	B	141	144	Right-handed 310
Helix 30	30	B	181	189	Right-handed alpha
Helix 31	31	B	198	209	Right-handed alpha
Helix 32	32	B	228	247	Right-handed alpha
Helix 33	33	B	252	260	Right-handed alpha
Helix 34	34	B	264	273	Right-handed alpha
Helix 35	35	B	274	276	Right-handed 310
Helix 36	36	B	278	289	Right-handed alpha
Helix 37	37	C	18	22	Right-handed 310
Helix 38	38	C	24	27	Right-handed 310
Helix 39	39	C	36	46	Right-handed alpha
Helix 40	40	C	59	68	Right-handed alpha
Helix 41	41	C	70	74	Right-handed 310
Helix 42	42	C	87	89	Right-handed 310
Helix 43	43	C	90	95	Right-handed alpha
Helix 44	44	C	95	100	Right-handed alpha
Helix 45	45	C	117	128	Right-handed alpha
Helix 46	46	C	141	144	Right-handed 310
Helix 47	47	C	181	188	Right-handed alpha
Helix 48	48	C	198	208	Right-handed alpha
Helix 49	49	C	228	247	Right-handed alpha
Helix 50	50	C	252	260	Right-handed alpha
Helix 51	51	C	264	273	Right-handed alpha
Helix 52	52	C	274	276	Right-handed 310
Helix 53	53	C	278	290	Right-handed alpha
Helix 54	54	D	13	17	Right-handed 310
Helix 55	55	D	18	22	Right-handed 310
Helix 56	56	D	24	27	Right-handed 310
Helix 57	57	D	36	46	Right-handed alpha
Helix 58	58	D	59	68	Right-handed alpha
Helix 59	59	D	70	74	Right-handed 310
Helix 60	60	D	87	89	Right-handed 310
Helix 61	61	D	90	95	Right-handed alpha
Helix 62	62	D	95	100	Right-handed alpha
Helix 63	63	D	117	127	Right-handed alpha
Helix 64	64	D	141	144	Right-handed 310
Helix 65	65	D	181	189	Right-handed alpha
Helix 66	66	D	198	208	Right-handed alpha
Helix 67	67	D	228	247	Right-handed alpha
Helix 68	68	D	252	260	Right-handed alpha
Helix 69	69	D	264	273	Right-handed alpha
Helix 70	70	D	274	276	Right-handed 310
Helix 71	71	D	278	287	Right-handed alpha
Helix 72	72	E	13	17	Right-handed 310
Helix 73	73	E	24	27	Right-handed 310
Helix 74	74	E	36	46	Right-handed alpha
Helix 75	75	E	59	68	Right-handed alpha
Helix 76	76	E	70	74	Right-handed 310
Helix 77	77	E	89	95	Right-handed alpha
Helix 78	78	E	95	100	Right-handed alpha
Helix 79	79	E	117	127	Right-handed alpha
Helix 80	80	E	141	144	Right-handed 310
Helix 81	81	E	181	189	Right-handed alpha
Helix 82	82	E	198	208	Right-handed alpha
Helix 83	83	E	228	247	Right-handed alpha
Helix 84	84	E	252	260	Right-handed alpha
Helix 85	85	E	264	273	Right-handed alpha
Helix 86	86	E	274	276	Right-handed 310
Helix 87	87	E	278	288	Right-handed alpha
Helix 88	88	F	13	17	Right-handed 310
Helix 89	89	F	18	22	Right-handed 310
Helix 90	90	F	24	27	Right-handed 310
Helix 91	91	F	36	46	Right-handed alpha
Helix 92	92	F	56	58	Right-handed 310
Helix 93	93	F	59	68	Right-handed alpha
Helix 94	94	F	70	74	Right-handed 310
Helix 95	95	F	89	95	Right-handed alpha
Helix 96	96	F	95	100	Right-handed alpha
Helix 97	97	F	117	128	Right-handed alpha
Helix 98	98	F	141	144	Right-handed 310
Helix 99	99	F	181	189	Right-handed alpha
Helix 100	100	F	198	208	Right-handed alpha
Helix 101	101	F	228	247	Right-handed alpha
Helix 102	102	F	252	260	Right-handed alpha
Helix 103	103	F	264	273	Right-handed alpha
Helix 104	104	F	274	276	Right-handed 310
Helix 105	105	F	278	288	Right-handed alpha
Helix 106	106	G	13	17	Right-handed 310
Helix 107	107	G	18	23	Right-handed alpha
Helix 108	108	G	36	46	Right-handed alpha
Helix 109	109	G	59	68	Right-handed alpha
Helix 110	110	G	70	74	Right-handed 310
Helix 111	111	G	87	89	Right-handed 310
Helix 112	112	G	90	95	Right-handed alpha
Helix 113	113	G	95	100	Right-handed alpha
Helix 114	114	G	117	127	Right-handed alpha
Helix 115	115	G	141	144	Right-handed 310
Helix 116	116	G	181	188	Right-handed alpha
Helix 117	117	G	198	209	Right-handed alpha
Helix 118	118	G	228	247	Right-handed alpha
Helix 119	119	G	252	260	Right-handed alpha
Helix 120	120	G	264	273	Right-handed alpha
Helix 121	121	G	274	276	Right-handed 310
Helix 122	122	G	278	288	Right-handed alpha
Helix 123	123	H	13	17	Right-handed 310
Helix 124	124	H	24	27	Right-handed 310
Helix 125	125	H	36	46	Right-handed alpha
Helix 126	126	H	59	68	Right-handed alpha
Helix 127	127	H	70	74	Right-handed 310
Helix 128	128	H	87	89	Right-handed 310
Helix 129	129	H	90	95	Right-handed alpha
Helix 130	130	H	95	100	Right-handed alpha
Helix 131	131	H	117	127	Right-handed alpha
Helix 132	132	H	141	144	Right-handed 310
Helix 133	133	H	181	189	Right-handed alpha
Helix 134	134	H	198	209	Right-handed alpha
Helix 135	135	H	228	247	Right-handed alpha
Helix 136	136	H	252	260	Right-handed alpha
Helix 137	137	H	264	273	Right-handed alpha
Helix 138	138	H	274	276	Right-handed 310
Helix 139	139	H	278	288	Right-handed alpha

There are 33 sheets in PDB entry 1G1L. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	212	216	first strand
Strand 2	A	132	138	parallel
Strand 3	A	170	178	anti-parallel
Strand 4	A	103	108	anti-parallel
Strand 5	A	3	8	parallel
Strand 6	A	50	55	parallel
Strand 7	A	76	81	parallel

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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	212	216	first strand
Strand 2	A	132	138	parallel
Strand 3	A	170	178	anti-parallel
Strand 4	A	146	150	anti-parallel
Strand 5	A	156	161	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	30	first strand
Strand 2	A	33	34	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	111	114	first strand
Strand 2	A	222	225	anti-parallel

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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	212	216	first strand
Strand 2	B	132	138	parallel
Strand 3	B	170	178	anti-parallel
Strand 4	B	103	108	anti-parallel
Strand 5	B	3	8	parallel
Strand 6	B	50	55	parallel
Strand 7	B	76	81	parallel

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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	212	216	first strand
Strand 2	B	132	138	parallel
Strand 3	B	170	178	anti-parallel
Strand 4	B	146	150	anti-parallel
Strand 5	B	156	161	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	30	first strand
Strand 2	B	33	34	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	111	114	first strand
Strand 2	B	222	225	anti-parallel

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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	212	216	first strand
Strand 2	C	132	138	parallel
Strand 3	C	170	178	anti-parallel
Strand 4	C	103	108	anti-parallel
Strand 5	C	3	8	parallel
Strand 6	C	50	55	parallel
Strand 7	C	76	81	parallel

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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	212	216	first strand
Strand 2	C	132	138	parallel
Strand 3	C	170	178	anti-parallel
Strand 4	C	146	150	anti-parallel
Strand 5	C	156	161	anti-parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	30	first strand
Strand 2	C	33	34	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	111	114	first strand
Strand 2	C	222	225	anti-parallel

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There are 7 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	212	216	first strand
Strand 2	D	132	138	parallel
Strand 3	D	170	178	anti-parallel
Strand 4	D	103	108	anti-parallel
Strand 5	D	3	8	parallel
Strand 6	D	50	55	parallel
Strand 7	D	76	81	parallel

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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	212	216	first strand
Strand 2	D	132	138	parallel
Strand 3	D	170	178	anti-parallel
Strand 4	D	146	150	anti-parallel
Strand 5	D	156	161	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	29	30	first strand
Strand 2	D	33	34	anti-parallel

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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	111	114	first strand
Strand 2	D	222	225	anti-parallel

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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	212	216	first strand
Strand 2	E	132	138	parallel
Strand 3	E	170	172	anti-parallel

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There are 7 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	212	216	first strand
Strand 2	E	132	138	parallel
Strand 3	E	175	178	anti-parallel
Strand 4	E	103	108	anti-parallel
Strand 5	E	3	8	parallel
Strand 6	E	50	55	parallel
Strand 7	E	76	81	parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	29	30	first strand
Strand 2	E	33	34	anti-parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	111	114	first strand
Strand 2	E	222	225	anti-parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	146	150	first strand
Strand 2	E	156	161	anti-parallel

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There are 7 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	212	216	first strand
Strand 2	F	132	138	parallel
Strand 3	F	170	178	anti-parallel
Strand 4	F	103	108	anti-parallel
Strand 5	F	3	8	parallel
Strand 6	F	50	55	parallel
Strand 7	F	76	81	parallel

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There are 5 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	212	216	first strand
Strand 2	F	132	138	parallel
Strand 3	F	170	178	anti-parallel
Strand 4	F	146	150	anti-parallel
Strand 5	F	156	161	anti-parallel

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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	29	30	first strand
Strand 2	F	33	34	anti-parallel

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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	111	114	first strand
Strand 2	F	222	225	anti-parallel

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There are 5 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	212	216	first strand
Strand 2	G	132	138	parallel
Strand 3	G	170	172	anti-parallel
Strand 4	G	146	150	anti-parallel
Strand 5	G	156	161	anti-parallel

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There are 7 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	212	216	first strand
Strand 2	G	132	138	parallel
Strand 3	G	175	178	anti-parallel
Strand 4	G	103	108	anti-parallel
Strand 5	G	3	8	parallel
Strand 6	G	50	55	parallel
Strand 7	G	76	81	parallel

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There are 2 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	29	30	first strand
Strand 2	G	33	34	anti-parallel

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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	111	114	first strand
Strand 2	G	222	225	anti-parallel

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There are 5 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	212	216	first strand
Strand 2	H	132	138	parallel
Strand 3	H	170	172	anti-parallel
Strand 4	H	146	150	anti-parallel
Strand 5	H	156	161	anti-parallel

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There are 7 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	212	216	first strand
Strand 2	H	132	138	parallel
Strand 3	H	175	178	anti-parallel
Strand 4	H	103	108	anti-parallel
Strand 5	H	3	8	parallel
Strand 6	H	50	55	parallel
Strand 7	H	76	81	parallel

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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	29	30	first strand
Strand 2	H	33	34	anti-parallel

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There are 2 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	111	114	first strand
Strand 2	H	222	225	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1G1L

Analysis of interatomic Contacts of Structural Units in PDB entry:
1G1L