Analysis of interatomic Contacts of Structural Units in PDB entry:
1G29


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1G29 entry

There are 2 chains in PDB entry 1G29 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
1
 MET 1PHE 372
2
 MET 1PHE 372
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 1G29. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
1
41 51Right-handed alpha
Helix 2
2
1
70 73Right-handed 310
Helix 3
3
1
77 81Right-handed 310
Helix 4
4
1
97 109Right-handed alpha
Helix 5
5
1
112 127Right-handed alpha
Helix 6
6
1
129 133Right-handed 310
Helix 7
7
1
136 140Right-handed 310
Helix 8
8
1
141 156Right-handed alpha
Helix 9
9
1
171 190Right-handed alpha
Helix 10
10
1
199 207Right-handed alpha
Helix 11
11
1
223 230Right-handed alpha
Helix 12
12
1
233 240Right-handed alpha
Helix 13
13
1
268 278Right-handed alpha
Helix 14
14
1
290 292Right-handed 310
Helix 15
15
1
357 360Right-handed 310
Helix 16
16
2
41 51Right-handed alpha
Helix 17
17
2
70 73Right-handed 310
Helix 18
18
2
77 81Right-handed 310
Helix 19
19
2
87 92Right-handed alpha
Helix 20
20
2
97 109Right-handed alpha
Helix 21
21
2
112 127Right-handed alpha
Helix 22
22
2
129 133Right-handed 310
Helix 23
23
2
136 140Right-handed 310
Helix 24
24
2
141 156Right-handed alpha
Helix 25
25
2
171 190Right-handed alpha
Helix 26
26
2
199 207Right-handed alpha
Helix 27
27
2
223 230Right-handed alpha
Helix 28
28
2
233 240Right-handed alpha
Helix 29
29
2
268 278Right-handed alpha
Helix 30
30
2
290 292Right-handed 310
Helix 31
31
2
357 360Right-handed 310
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There are 8 sheets in PDB entry 1G29. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
16 27first strand
Strand 2
1
2 13anti-parallel
Strand 3
1
57 62anti-parallel
Strand 4
1
65 69anti-parallel
Strand 5
1
74 75anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
83 86first strand
Strand 2
1
160 164parallel
Strand 3
1
192 197parallel
Strand 4
1
31 35parallel
Strand 5
1
209 214parallel
Strand 6
1
217 222anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
264 266first strand
Strand 2
1
257 259anti-parallel
Strand 3
1
246 252anti-parallel
Strand 4
1
284 289anti-parallel
Strand 5
1
361 364anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
1
294 296first strand
Strand 2
1
350 355anti-parallel
Strand 3
1
309 319anti-parallel
Strand 4
1
324 330anti-parallel
Strand 5
1
333 339anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
16 26first strand
Strand 2
2
4 13anti-parallel
Strand 3
2
57 62anti-parallel
Strand 4
2
65 69anti-parallel
Strand 5
2
74 75anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
83 85first strand
Strand 2
2
160 164parallel
Strand 3
2
192 197parallel
Strand 4
2
31 35parallel
Strand 5
2
209 214parallel
Strand 6
2
217 222anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
264 266first strand
Strand 2
2
257 259anti-parallel
Strand 3
2
246 252anti-parallel
Strand 4
2
284 289anti-parallel
Strand 5
2
361 364anti-parallel
Strand 6
2
370 372anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
2
294 296first strand
Strand 2
2
350 355anti-parallel
Strand 3
2
309 319anti-parallel
Strand 4
2
324 330anti-parallel
Strand 5
2
333 339anti-parallel
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