Analysis of interatomic Contacts of Structural Units in PDB entry:
1G3T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1G3T entry

There are 2 chains in PDB entry 1G3T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3LEU 226
B
 ASP 1003VAL 1140
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 1G3T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 22Right-handed alpha
Helix 2
2
A
26 35Right-handed alpha
Helix 3
3
A
37 51Right-handed alpha
Helix 4
4
A
65 89Right-handed alpha
Helix 5
5
A
93 105Right-handed alpha
Helix 6
6
A
109 120Right-handed alpha
Helix 7
7
A
135 139Right-handed 310
Helix 8
8
A
152 156Right-handed alpha
Helix 9
9
A
178 185Right-handed alpha
Helix 10
10
A
214 221Right-handed alpha
Helix 11
11
B
1003 1021Right-handed alpha
Helix 12
12
B
1026 1034Right-handed alpha
Helix 13
13
B
1037 1051Right-handed alpha
Helix 14
14
B
1065 1089Right-handed alpha
Helix 15
15
B
1093 1105Right-handed alpha
Helix 16
16
B
1109 1120Right-handed alpha
Helix 17
17
B
1134 1139Right-handed alpha
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There are 3 sheets in PDB entry 1G3T. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 56first strand
Strand 2
A
62 64anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 167first strand
Strand 2
A
194 197anti-parallel
Strand 3
A
202 206anti-parallel
Strand 4
A
209 212anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1054 1056first strand
Strand 2
B
1062 1064anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il