Analysis of interatomic Contacts of Structural Units in PDB entry:
1G41


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1G41 entry

There is 1 chain in PDB entry 1G41 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2LEU 444
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 1G41. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 15Right-handed alpha
Helix 2
2
A
20 40Right-handed alpha
Helix 3
3
A
62 75Right-handed alpha
Helix 4
4
A
84 87Right-handed 310
Helix 5
5
A
96 118Right-handed alpha
Helix 6
6
A
227 231Right-handed 310
Helix 7
7
A
236 252Right-handed alpha
Helix 8
8
A
271 288Right-handed alpha
Helix 9
9
A
315 319Right-handed 310
Helix 10
10
A
320 325Right-handed alpha
Helix 11
11
A
337 347Right-handed alpha
Helix 12
12
A
351 362Right-handed alpha
Helix 13
13
A
370 388Right-handed alpha
Helix 14
14
A
391 393Right-handed 310
Helix 15
15
A
394 411Right-handed alpha
Helix 16
16
A
412 414Right-handed 310
Helix 17
17
A
422 431Right-handed alpha
Helix 18
18
A
436 444Right-handed alpha
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There are 3 sheets in PDB entry 1G41. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
78 82first strand
Strand 2
A
253 257parallel
Strand 3
A
304 309parallel
Strand 4
A
53 56parallel
Strand 5
A
329 332parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 293first strand
Strand 2
A
296 299anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
366 369first strand
Strand 2
A
418 421parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il