Analysis of interatomic Contacts of Structural Units in PDB entry:
1G5C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1G5C entry

There are 6 chains in PDB entry 1G5C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 2GLU 170
B
 ILE 2GLU 170
C
 ILE 2GLU 170
D
 ILE 2GLU 170
E
 ILE 2GLU 170
F
 ILE 2GLU 170
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 1G5C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 11Right-handed alpha
Helix 2
2
A
17 21Right-handed 310
Helix 3
3
A
34 38Right-handed 310
Helix 4
4
A
39 46Right-handed alpha
Helix 5
5
A
63 78Right-handed alpha
Helix 6
6
A
96 107Right-handed alpha
Helix 7
7
A
110 122Right-handed alpha
Helix 8
8
A
127 142Right-handed alpha
Helix 9
9
B
2 11Right-handed alpha
Helix 10
10
B
34 38Right-handed 310
Helix 11
11
B
39 46Right-handed alpha
Helix 12
12
B
58 61Right-handed 310
Helix 13
13
B
63 76Right-handed alpha
Helix 14
14
B
90 94Right-handed 310
Helix 15
15
B
96 107Right-handed alpha
Helix 16
16
B
110 121Right-handed alpha
Helix 17
17
B
127 141Right-handed alpha
Helix 18
18
C
2 12Right-handed alpha
Helix 19
19
C
17 21Right-handed 310
Helix 20
20
C
34 38Right-handed 310
Helix 21
21
C
39 46Right-handed alpha
Helix 22
22
C
63 78Right-handed alpha
Helix 23
23
C
90 94Right-handed 310
Helix 24
24
C
96 107Right-handed alpha
Helix 25
25
C
110 121Right-handed alpha
Helix 26
26
C
127 141Right-handed alpha
Helix 27
27
D
2 12Right-handed alpha
Helix 28
28
D
34 38Right-handed 310
Helix 29
29
D
39 46Right-handed alpha
Helix 30
30
D
63 78Right-handed alpha
Helix 31
31
D
90 95Right-handed 310
Helix 32
32
D
96 107Right-handed alpha
Helix 33
33
D
110 122Right-handed alpha
Helix 34
34
D
127 141Right-handed alpha
Helix 35
35
E
2 11Right-handed alpha
Helix 36
36
E
17 21Right-handed 310
Helix 37
37
E
34 38Right-handed 310
Helix 38
38
E
39 46Right-handed alpha
Helix 39
39
E
58 61Right-handed 310
Helix 40
40
E
63 78Right-handed alpha
Helix 41
41
E
97 106Right-handed alpha
Helix 42
42
E
113 117Right-handed 310
Helix 43
43
E
127 142Right-handed alpha
Helix 44
44
F
2 10Right-handed alpha
Helix 45
45
F
34 38Right-handed 310
Helix 46
46
F
39 46Right-handed alpha
Helix 47
47
F
58 61Right-handed 310
Helix 48
48
F
63 76Right-handed alpha
Helix 49
49
F
90 95Right-handed 310
Helix 50
50
F
96 107Right-handed alpha
Helix 51
51
F
110 121Right-handed alpha
Helix 52
52
F
127 141Right-handed alpha
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There are 6 sheets in PDB entry 1G5C. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 57first strand
Strand 2
A
27 32parallel
Strand 3
A
81 87parallel
Strand 4
A
150 156parallel
Strand 5
A
163 167anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 57first strand
Strand 2
B
27 32parallel
Strand 3
B
81 87parallel
Strand 4
B
150 156parallel
Strand 5
B
163 167anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 57first strand
Strand 2
C
27 32parallel
Strand 3
C
81 87parallel
Strand 4
C
150 156parallel
Strand 5
C
163 167anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
53 57first strand
Strand 2
D
27 32parallel
Strand 3
D
81 87parallel
Strand 4
D
150 156parallel
Strand 5
D
163 167anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
53 57first strand
Strand 2
E
27 32parallel
Strand 3
E
81 87parallel
Strand 4
E
150 156parallel
Strand 5
E
163 167anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
53 57first strand
Strand 2
F
27 32parallel
Strand 3
F
81 87parallel
Strand 4
F
150 156parallel
Strand 5
F
163 167anti-parallel
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