Analysis of interatomic Contacts of Structural Units in PDB entry:
1G60


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1G60 entry

There are 2 chains in PDB entry 1G60 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 256
B
 MET 1GLN 256
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 1G60. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 19Right-handed alpha
Helix 2
2
A
38 42Right-handed 310
Helix 3
3
A
45 63Right-handed alpha
Helix 4
4
A
75 89Right-handed alpha
Helix 5
5
A
131 135Right-handed 310
Helix 6
6
A
140 152Right-handed alpha
Helix 7
7
A
198 210Right-handed alpha
Helix 8
8
A
224 233Right-handed alpha
Helix 9
9
A
243 256Right-handed alpha
Helix 10
10
B
11 19Right-handed alpha
Helix 11
11
B
38 42Right-handed 310
Helix 12
12
B
45 63Right-handed alpha
Helix 13
13
B
75 89Right-handed alpha
Helix 14
14
B
131 135Right-handed 310
Helix 15
15
B
198 210Right-handed alpha
Helix 16
16
B
224 233Right-handed alpha
Helix 17
17
B
243 256Right-handed alpha
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There are 3 sheets in PDB entry 1G60. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 9first strand
Strand 2
A
236 241parallel
Strand 3
A
215 218parallel
Strand 4
A
24 29parallel
Strand 5
A
64 74parallel
Strand 6
A
117 123anti-parallel
Strand 7
A
92 99anti-parallel
Strand 8
A
172 173parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 9first strand
Strand 2
B
236 241parallel
Strand 3
B
215 218parallel
Strand 4
B
24 29parallel
Strand 5
B
64 74parallel
Strand 6
B
117 123anti-parallel
Strand 7
B
92 99anti-parallel
Strand 8
B
172 173parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
153 155first strand
Strand 2
B
158 160anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il