Analysis of interatomic Contacts of Structural Units in PDB entry:
1G63

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 1G63 entry

There are 12 chains in PDB entry 1G63 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ASN 174
B	MET 1	ASN 174
C	MET 1	ASN 174
D	MET 1	ASN 174
E	MET 1	ASN 174
F	MET 1	ASN 174
G	MET 1	ASN 174
H	MET 1	ASN 174
I	MET 1	ASN 174
J	MET 1	ASN 174
K	MET 1	ASN 174
L	MET 1	ASN 174

There are120 helices in PDB entry 1G63. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	12	16	Right-handed 310
Helix 2	2	A	17	26	Right-handed alpha
Helix 3	3	A	38	43	Right-handed 310
Helix 4	4	A	45	52	Right-handed 310
Helix 5	5	A	66	73	Right-handed alpha
Helix 6	6	A	83	92	Right-handed alpha
Helix 7	7	A	97	106	Right-handed alpha
Helix 8	8	A	117	122	Right-handed alpha
Helix 9	9	A	123	135	Right-handed alpha
Helix 10	10	A	164	174	Right-handed alpha
Helix 11	11	B	12	16	Right-handed 310
Helix 12	12	B	17	26	Right-handed alpha
Helix 13	13	B	38	43	Right-handed 310
Helix 14	14	B	45	52	Right-handed 310
Helix 15	15	B	66	73	Right-handed alpha
Helix 16	16	B	83	92	Right-handed alpha
Helix 17	17	B	97	106	Right-handed alpha
Helix 18	18	B	117	122	Right-handed alpha
Helix 19	19	B	123	135	Right-handed alpha
Helix 20	20	B	164	173	Right-handed alpha
Helix 21	21	C	12	16	Right-handed 310
Helix 22	22	C	17	26	Right-handed alpha
Helix 23	23	C	38	43	Right-handed 310
Helix 24	24	C	45	52	Right-handed 310
Helix 25	25	C	66	73	Right-handed alpha
Helix 26	26	C	83	92	Right-handed alpha
Helix 27	27	C	97	106	Right-handed alpha
Helix 28	28	C	117	122	Right-handed alpha
Helix 29	29	C	123	135	Right-handed alpha
Helix 30	30	C	164	174	Right-handed alpha
Helix 31	31	D	12	16	Right-handed 310
Helix 32	32	D	17	26	Right-handed alpha
Helix 33	33	D	38	43	Right-handed 310
Helix 34	34	D	45	52	Right-handed 310
Helix 35	35	D	66	73	Right-handed alpha
Helix 36	36	D	83	92	Right-handed alpha
Helix 37	37	D	97	106	Right-handed alpha
Helix 38	38	D	117	122	Right-handed alpha
Helix 39	39	D	123	135	Right-handed alpha
Helix 40	40	D	164	174	Right-handed alpha
Helix 41	41	E	12	16	Right-handed 310
Helix 42	42	E	17	26	Right-handed alpha
Helix 43	43	E	38	43	Right-handed 310
Helix 44	44	E	45	52	Right-handed 310
Helix 45	45	E	66	73	Right-handed alpha
Helix 46	46	E	83	92	Right-handed alpha
Helix 47	47	E	97	106	Right-handed alpha
Helix 48	48	E	117	122	Right-handed alpha
Helix 49	49	E	123	135	Right-handed alpha
Helix 50	50	E	164	174	Right-handed alpha
Helix 51	51	F	12	16	Right-handed 310
Helix 52	52	F	17	26	Right-handed alpha
Helix 53	53	F	38	43	Right-handed 310
Helix 54	54	F	45	52	Right-handed 310
Helix 55	55	F	66	73	Right-handed alpha
Helix 56	56	F	83	92	Right-handed alpha
Helix 57	57	F	97	106	Right-handed alpha
Helix 58	58	F	117	122	Right-handed alpha
Helix 59	59	F	123	135	Right-handed alpha
Helix 60	60	F	164	174	Right-handed alpha
Helix 61	61	G	12	16	Right-handed 310
Helix 62	62	G	17	26	Right-handed alpha
Helix 63	63	G	38	43	Right-handed 310
Helix 64	64	G	45	52	Right-handed 310
Helix 65	65	G	66	73	Right-handed alpha
Helix 66	66	G	83	92	Right-handed alpha
Helix 67	67	G	97	106	Right-handed alpha
Helix 68	68	G	117	122	Right-handed alpha
Helix 69	69	G	123	135	Right-handed alpha
Helix 70	70	G	164	174	Right-handed alpha
Helix 71	71	H	12	16	Right-handed 310
Helix 72	72	H	17	26	Right-handed alpha
Helix 73	73	H	38	43	Right-handed 310
Helix 74	74	H	45	52	Right-handed 310
Helix 75	75	H	66	73	Right-handed alpha
Helix 76	76	H	83	92	Right-handed alpha
Helix 77	77	H	97	106	Right-handed alpha
Helix 78	78	H	117	122	Right-handed alpha
Helix 79	79	H	123	135	Right-handed alpha
Helix 80	80	H	164	174	Right-handed alpha
Helix 81	81	I	12	16	Right-handed 310
Helix 82	82	I	17	26	Right-handed alpha
Helix 83	83	I	38	43	Right-handed 310
Helix 84	84	I	45	52	Right-handed 310
Helix 85	85	I	66	73	Right-handed alpha
Helix 86	86	I	83	92	Right-handed alpha
Helix 87	87	I	97	106	Right-handed alpha
Helix 88	88	I	117	122	Right-handed alpha
Helix 89	89	I	123	135	Right-handed alpha
Helix 90	90	I	164	174	Right-handed alpha
Helix 91	91	J	12	16	Right-handed 310
Helix 92	92	J	17	26	Right-handed alpha
Helix 93	93	J	38	43	Right-handed 310
Helix 94	94	J	45	52	Right-handed 310
Helix 95	95	J	66	74	Right-handed alpha
Helix 96	96	J	83	93	Right-handed alpha
Helix 97	97	J	97	106	Right-handed alpha
Helix 98	98	J	117	122	Right-handed alpha
Helix 99	99	J	123	135	Right-handed alpha
Helix 100	100	J	164	174	Right-handed alpha
Helix 101	101	K	12	16	Right-handed 310
Helix 102	102	K	17	27	Right-handed alpha
Helix 103	103	K	38	43	Right-handed 310
Helix 104	104	K	47	52	Right-handed 310
Helix 105	105	K	66	73	Right-handed alpha
Helix 106	106	K	83	92	Right-handed alpha
Helix 107	107	K	97	106	Right-handed alpha
Helix 108	108	K	117	122	Right-handed alpha
Helix 109	109	K	123	135	Right-handed alpha
Helix 110	110	K	164	174	Right-handed alpha
Helix 111	111	L	12	17	Right-handed 310
Helix 112	112	L	18	26	Right-handed alpha
Helix 113	113	L	38	43	Right-handed 310
Helix 114	114	L	45	52	Right-handed 310
Helix 115	115	L	66	74	Right-handed alpha
Helix 116	116	L	83	92	Right-handed alpha
Helix 117	117	L	97	106	Right-handed alpha
Helix 118	118	L	117	122	Right-handed alpha
Helix 119	119	L	123	135	Right-handed alpha
Helix 120	120	L	164	173	Right-handed alpha

There are 20 sheets in PDB entry 1G63. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	56	57	first strand
Strand 2	A	32	36	parallel
Strand 3	A	5	9	parallel
Strand 4	A	76	82	parallel
Strand 5	A	110	114	parallel
Strand 6	A	139	140	parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	144	145	first strand
Strand 2	A	160	161	anti-parallel

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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	56	57	first strand
Strand 2	B	32	36	parallel
Strand 3	B	5	9	parallel
Strand 4	B	76	82	parallel
Strand 5	B	110	114	parallel
Strand 6	B	139	140	parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	144	149	first strand
Strand 2	B	156	161	anti-parallel

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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	56	57	first strand
Strand 2	C	32	36	parallel
Strand 3	C	5	9	parallel
Strand 4	C	76	82	parallel
Strand 5	C	110	114	parallel
Strand 6	C	139	140	parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	144	145	first strand
Strand 2	C	160	161	anti-parallel

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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	56	57	first strand
Strand 2	D	32	36	parallel
Strand 3	D	5	9	parallel
Strand 4	D	76	82	parallel
Strand 5	D	110	114	parallel
Strand 6	D	139	140	parallel

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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	56	57	first strand
Strand 2	E	32	36	parallel
Strand 3	E	5	9	parallel
Strand 4	E	76	82	parallel
Strand 5	E	110	114	parallel
Strand 6	E	139	140	parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	144	145	first strand
Strand 2	E	160	161	anti-parallel

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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	56	57	first strand
Strand 2	F	32	36	parallel
Strand 3	F	5	9	parallel
Strand 4	F	76	82	parallel
Strand 5	F	110	114	parallel
Strand 6	F	139	140	parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	144	150	first strand
Strand 2	F	155	161	anti-parallel

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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	56	57	first strand
Strand 2	G	32	36	parallel
Strand 3	G	5	9	parallel
Strand 4	G	76	82	parallel
Strand 5	G	110	114	parallel
Strand 6	G	139	140	parallel

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There are 6 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	56	57	first strand
Strand 2	H	32	36	parallel
Strand 3	H	5	9	parallel
Strand 4	H	76	82	parallel
Strand 5	H	110	114	parallel
Strand 6	H	139	140	parallel

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There are 6 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	56	57	first strand
Strand 2	I	32	36	parallel
Strand 3	I	5	9	parallel
Strand 4	I	76	82	parallel
Strand 5	I	110	114	parallel
Strand 6	I	139	140	parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	144	145	first strand
Strand 2	I	160	161	anti-parallel

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There are 6 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	56	57	first strand
Strand 2	J	32	36	parallel
Strand 3	J	5	9	parallel
Strand 4	J	76	82	parallel
Strand 5	J	110	114	parallel
Strand 6	J	139	140	parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	144	146	first strand
Strand 2	J	159	161	anti-parallel

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There are 6 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	56	57	first strand
Strand 2	K	32	36	parallel
Strand 3	K	5	9	parallel
Strand 4	K	76	82	parallel
Strand 5	K	110	114	parallel
Strand 6	K	139	140	parallel

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There are 6 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	56	57	first strand
Strand 2	L	32	36	parallel
Strand 3	L	5	9	parallel
Strand 4	L	76	82	parallel
Strand 5	L	110	114	parallel
Strand 6	L	139	140	parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	144	146	first strand
Strand 2	L	159	161	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 1G63

Analysis of interatomic Contacts of Structural Units in PDB entry:
1G63