Analysis of interatomic Contacts of Structural Units in PDB entry:
1G6G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1G6G entry


Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 6 chains in PDB entry 1G6G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 29LEU 155
B
 ILE 32LEU 155
E
 SER 1VAL 4
E
 GLU 6ASP 8
F
 LEU 2VAL 4
F
 GLU 6LYS 13
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 1G6G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
51 58Right-handed alpha
Helix 2
2
A
136 140Right-handed 310
Helix 3
3
A
148 155Right-handed alpha
Helix 4
4
B
51 58Right-handed alpha
Helix 5
5
B
136 140Right-handed 310
Helix 6
6
B
148 154Right-handed alpha
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There are 4 sheets in PDB entry 1G6G. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 50first strand
Strand 2
A
31 38anti-parallel
Strand 3
A
141 147anti-parallel
Strand 4
A
129 132anti-parallel
Strand 5
A
110 111anti-parallel
Strand 6
A
114 115anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 77first strand
Strand 2
A
64 69parallel
Strand 3
A
89 93anti-parallel
Strand 4
A
99 103anti-parallel
Strand 5
A
122 123anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 48first strand
Strand 2
B
34 38anti-parallel
Strand 3
B
141 147anti-parallel
Strand 4
B
129 132anti-parallel
Strand 5
B
109 111anti-parallel
Strand 6
B
114 115anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 77first strand
Strand 2
B
62 69parallel
Strand 3
B
89 94anti-parallel
Strand 4
B
99 103anti-parallel
Strand 5
B
122 123anti-parallel
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