Analysis of interatomic Contacts of Structural Units in PDB entry:
1G6N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1G6N entry

There are 2 chains in PDB entry 1G6N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 7TYR 206
B
 THR 307GLY 507
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 1G6N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 16Right-handed alpha
Helix 2
2
A
99 109Right-handed alpha
Helix 3
3
A
110 137Right-handed alpha
Helix 4
4
A
138 151Right-handed alpha
Helix 5
5
A
168 177Right-handed alpha
Helix 6
6
A
179 193Right-handed alpha
Helix 7
7
B
308 317Right-handed alpha
Helix 8
8
B
399 409Right-handed alpha
Helix 9
9
B
410 437Right-handed alpha
Helix 10
10
B
438 453Right-handed alpha
Helix 11
11
B
468 477Right-handed alpha
Helix 12
12
B
479 493Right-handed alpha
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There are 6 sheets in PDB entry 1G6N. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
19 23first strand
Strand 2
A
92 98anti-parallel
Strand 3
A
38 44anti-parallel
Strand 4
A
69 70anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
28 30first strand
Strand 2
A
85 88anti-parallel
Strand 3
A
47 52anti-parallel
Strand 4
A
58 64anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 158first strand
Strand 2
A
163 165anti-parallel
Strand 3
A
202 205anti-parallel
Strand 4
A
196 199anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
319 323first strand
Strand 2
B
392 398anti-parallel
Strand 3
B
338 344anti-parallel
Strand 4
B
369 370anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
328 330first strand
Strand 2
B
385 388anti-parallel
Strand 3
B
346 352anti-parallel
Strand 4
B
358 365anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
457 459first strand
Strand 2
B
462 466anti-parallel
Strand 3
B
502 506anti-parallel
Strand 4
B
496 499anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il