Analysis of interatomic Contacts of Structural Units in PDB entry:
1G6O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1G6O entry

There are 2 chains in PDB entry 1G6O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 6LYS 328
B
 LEU 6LYS 328
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 1G6O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 15Right-handed alpha
Helix 2
2
A
14 37Right-handed alpha
Helix 3
3
A
36 41Right-handed alpha
Helix 4
4
A
73 76Right-handed 310
Helix 5
5
A
77 92Right-handed alpha
Helix 6
6
A
141 148Right-handed alpha
Helix 7
7
A
156 171Right-handed alpha
Helix 8
8
A
183 192Right-handed alpha
Helix 9
9
A
193 195Right-handed 310
Helix 10
10
A
228 237Right-handed alpha
Helix 11
11
A
252 263Right-handed alpha
Helix 12
12
A
276 290Right-handed alpha
Helix 13
13
A
291 295Right-handed 310
Helix 14
14
A
298 310Right-handed alpha
Helix 15
15
B
6 15Right-handed alpha
Helix 16
16
B
14 37Right-handed alpha
Helix 17
17
B
36 41Right-handed alpha
Helix 18
18
B
73 76Right-handed 310
Helix 19
19
B
77 92Right-handed alpha
Helix 20
20
B
141 148Right-handed alpha
Helix 21
21
B
156 171Right-handed alpha
Helix 22
22
B
183 192Right-handed alpha
Helix 23
23
B
193 195Right-handed 310
Helix 24
24
B
228 237Right-handed alpha
Helix 25
25
B
252 263Right-handed alpha
Helix 26
26
B
276 290Right-handed alpha
Helix 27
27
B
291 295Right-handed 310
Helix 28
28
B
298 310Right-handed alpha
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There are 4 sheets in PDB entry 1G6O. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 69first strand
Strand 2
A
55 60anti-parallel
Strand 3
A
45 50anti-parallel
Strand 4
A
129 133anti-parallel
Strand 5
A
113 117anti-parallel
Strand 6
A
103 107anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
218 222first strand
Strand 2
A
201 205parallel
Strand 3
A
243 246parallel
Strand 4
A
268 273parallel
Strand 5
A
174 178parallel
Strand 6
A
312 316parallel
Strand 7
A
322 327anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 69first strand
Strand 2
B
55 60anti-parallel
Strand 3
B
45 50anti-parallel
Strand 4
B
129 133anti-parallel
Strand 5
B
113 117anti-parallel
Strand 6
B
103 107anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
218 222first strand
Strand 2
B
201 205parallel
Strand 3
B
243 246parallel
Strand 4
B
268 273parallel
Strand 5
B
174 178parallel
Strand 6
B
312 316parallel
Strand 7
B
322 327anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il