Analysis of interatomic Contacts of Structural Units in PDB entry:
1G71


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1G71 entry

There are 2 chains in PDB entry 1G71 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 344
B
 MET 1LEU 344
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 43 helices in PDB entry 1G71. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
7 18Right-handed alpha
Helix 2
2
A
20 24Right-handed 310
Helix 3
3
A
25 30Right-handed alpha
Helix 4
4
A
31 35Right-handed 310
Helix 5
5
A
55 67Right-handed alpha
Helix 6
6
A
81 84Right-handed 310
Helix 7
7
A
114 135Right-handed alpha
Helix 8
8
A
156 160Right-handed 310
Helix 9
9
A
163 175Right-handed alpha
Helix 10
10
A
181 192Right-handed alpha
Helix 11
11
A
193 198Right-handed 310
Helix 12
12
A
201 215Right-handed alpha
Helix 13
13
A
218 224Right-handed alpha
Helix 14
14
A
228 238Right-handed alpha
Helix 15
15
A
238 246Right-handed alpha
Helix 16
16
A
260 276Right-handed alpha
Helix 17
17
A
280 286Right-handed alpha
Helix 18
18
A
311 318Right-handed alpha
Helix 19
19
A
319 324Right-handed alpha
Helix 20
20
A
326 328Right-handed 310
Helix 21
21
A
329 344Right-handed alpha
Helix 22
22
B
7 18Right-handed alpha
Helix 23
23
B
20 24Right-handed 310
Helix 24
24
B
25 30Right-handed alpha
Helix 25
25
B
31 35Right-handed 310
Helix 26
26
B
55 67Right-handed alpha
Helix 27
27
B
81 84Right-handed 310
Helix 28
28
B
114 135Right-handed alpha
Helix 29
29
B
156 160Right-handed 310
Helix 30
30
B
163 175Right-handed alpha
Helix 31
31
B
181 190Right-handed alpha
Helix 32
32
B
191 191Right-handed 310
Helix 33
33
B
192 198Right-handed 310
Helix 34
34
B
201 215Right-handed alpha
Helix 35
35
B
218 225Right-handed alpha
Helix 36
36
B
228 238Right-handed alpha
Helix 37
37
B
238 246Right-handed alpha
Helix 38
38
B
260 276Right-handed alpha
Helix 39
39
B
280 286Right-handed alpha
Helix 40
40
B
311 318Right-handed alpha
Helix 41
41
B
319 324Right-handed alpha
Helix 42
42
B
326 328Right-handed 310
Helix 43
43
B
329 344Right-handed alpha
Back to top of page

There are 8 sheets in PDB entry 1G71. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 51first strand
Strand 2
A
37 40anti-parallel
Strand 3
A
70 74anti-parallel
Strand 4
A
290 292anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
76 80first strand
Strand 2
A
85 90anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 97first strand
Strand 2
A
149 154anti-parallel
Strand 3
A
141 145anti-parallel
Strand 4
A
306 309anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
297 298first strand
Strand 2
A
303 304anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 51first strand
Strand 2
B
37 40anti-parallel
Strand 3
B
70 74anti-parallel
Strand 4
B
290 292anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
76 80first strand
Strand 2
B
85 90anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 97first strand
Strand 2
B
149 154anti-parallel
Strand 3
B
141 145anti-parallel
Strand 4
B
306 309anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
297 298first strand
Strand 2
B
303 304anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il