Analysis of interatomic Contacts of Structural Units in PDB entry:
1G7R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1G7R entry

There is 1 chain in PDB entry 1G7R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1ASN 585
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 1G7R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 31Right-handed alpha
Helix 2
2
A
49 56Right-handed alpha
Helix 3
3
A
59 63Right-handed 310
Helix 4
4
A
63 68Right-handed 310
Helix 5
5
A
108 121Right-handed alpha
Helix 6
6
A
131 135Right-handed 310
Helix 7
7
A
145 152Right-handed alpha
Helix 8
8
A
154 175Right-handed alpha
Helix 9
9
A
183 185Right-handed 310
Helix 10
10
A
204 220Right-handed alpha
Helix 11
11
A
221 223Right-handed 310
Helix 12
12
A
329 346Right-handed alpha
Helix 13
13
A
359 373Right-handed alpha
Helix 14
14
A
386 398Right-handed alpha
Helix 15
15
A
414 420Right-handed alpha
Helix 16
16
A
433 459Right-handed alpha
Helix 17
17
A
551 557Right-handed alpha
Helix 18
18
A
567 583Right-handed alpha
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There are 8 sheets in PDB entry 1G7R. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
225 226anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 48first strand
Strand 2
A
71 75anti-parallel
Strand 3
A
7 11parallel
Strand 4
A
96 102parallel
Strand 5
A
125 130parallel
Strand 6
A
191 196parallel
Strand 7
A
178 181parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 88first strand
Strand 2
A
91 92anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
296 299first strand
Strand 2
A
279 283anti-parallel
Strand 3
A
306 311anti-parallel
Strand 4
A
245 255anti-parallel
Strand 5
A
233 242anti-parallel
Strand 6
A
323 326anti-parallel
Strand 7
A
263 267anti-parallel
Strand 8
A
272 276anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 259first strand
Strand 2
A
301 303anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
379 382first strand
Strand 2
A
354 357parallel
Strand 3
A
405 409parallel
Strand 4
A
427 431parallel
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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
464 475first strand
Strand 2
A
545 548anti-parallel
Strand 3
A
496 498anti-parallel
Strand 4
A
504 513anti-parallel
Strand 5
A
527 532anti-parallel
Strand 6
A
480 489anti-parallel
Strand 7
A
464 475anti-parallel
Strand 8
A
504 513first strand
Strand 9
A
516 518anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
491 492first strand
Strand 2
A
520 521anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il