Analysis of interatomic Contacts of Structural Units in PDB entry:
1G82


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1G82 entry

There are 4 chains in PDB entry 1G82 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 52SER 208
B
 VAL 51GLN 207
C
 THR 52SER 206
D
 PRO 49ASP 203
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 1G82. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
52 61Right-handed alpha
Helix 2
2
A
131 134Right-handed 310
Helix 3
3
A
182 185Right-handed 310
Helix 4
4
A
193 197Right-handed 310
Helix 5
5
A
199 204Right-handed 310
Helix 6
6
B
53 61Right-handed alpha
Helix 7
7
B
90 93Right-handed 310
Helix 8
8
B
131 134Right-handed 310
Helix 9
9
B
174 178Right-handed 310
Helix 10
10
B
182 185Right-handed 310
Helix 11
11
B
200 205Right-handed alpha
Helix 12
12
C
53 62Right-handed alpha
Helix 13
13
C
90 93Right-handed 310
Helix 14
14
C
131 134Right-handed 310
Helix 15
15
C
174 178Right-handed 310
Helix 16
16
C
182 185Right-handed 310
Helix 17
17
C
193 197Right-handed 310
Helix 18
18
C
197 201Right-handed 310
Helix 19
19
D
49 61Right-handed alpha
Helix 20
20
D
90 93Right-handed 310
Helix 21
21
D
131 134Right-handed 310
Helix 22
22
D
174 178Right-handed 310
Helix 23
23
D
182 185Right-handed 310
Helix 24
24
D
193 197Right-handed 310
Helix 25
25
D
197 202Right-handed 310
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There are 10 sheets in PDB entry 1G82. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
161 163first strand
Strand 2
A
145 154anti-parallel
Strand 3
A
187 190anti-parallel
Strand 4
A
63 68anti-parallel
Strand 5
A
95 101anti-parallel
Strand 6
A
104 109anti-parallel
Strand 7
A
136 142anti-parallel
Strand 8
A
145 154anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 76first strand
Strand 2
A
82 85anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 118first strand
Strand 2
A
124 127anti-parallel
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There are 11 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
82 85first strand
Strand 2
B
72 76anti-parallel
Strand 3
B
63 68anti-parallel
Strand 4
B
95 101anti-parallel
Strand 5
B
104 109anti-parallel
Strand 6
B
136 142anti-parallel
Strand 7
B
145 154anti-parallel
Strand 8
B
161 163anti-parallel
Strand 9
B
145 154anti-parallel
Strand 10
B
187 190anti-parallel
Strand 11
B
63 68anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
115 118first strand
Strand 2
B
124 127anti-parallel
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There are 11 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
82 85first strand
Strand 2
C
72 76anti-parallel
Strand 3
C
63 68anti-parallel
Strand 4
C
95 101anti-parallel
Strand 5
C
104 109anti-parallel
Strand 6
C
136 140anti-parallel
Strand 7
C
146 154anti-parallel
Strand 8
C
161 163anti-parallel
Strand 9
C
146 154anti-parallel
Strand 10
C
187 190anti-parallel
Strand 11
C
63 68anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
115 118first strand
Strand 2
C
124 127anti-parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
161 163first strand
Strand 2
D
145 154anti-parallel
Strand 3
D
187 190anti-parallel
Strand 4
D
63 68anti-parallel
Strand 5
D
95 101anti-parallel
Strand 6
D
104 109anti-parallel
Strand 7
D
136 142anti-parallel
Strand 8
D
145 154anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
73 76first strand
Strand 2
D
82 85anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
115 118first strand
Strand 2
D
124 127anti-parallel
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