Analysis of interatomic Contacts of Structural Units in PDB entry:
1G83


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1G83 entry

There are 2 chains in PDB entry 1G83 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 85PRO 245
B
 THR 85PRO 245
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 1G83. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
143 147Right-handed 310
Helix 2
2
A
155 165Right-handed alpha
Helix 3
3
A
223 234Right-handed alpha
Helix 4
4
B
143 147Right-handed 310
Helix 5
5
B
155 164Right-handed alpha
Helix 6
6
B
223 234Right-handed alpha
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There are 4 sheets in PDB entry 1G83. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
130 134first strand
Strand 2
A
119 124anti-parallel
Strand 3
A
108 113anti-parallel
Strand 4
A
87 89anti-parallel
Strand 5
A
138 140anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 177first strand
Strand 2
A
185 192anti-parallel
Strand 3
A
198 207anti-parallel
Strand 4
A
213 214anti-parallel
Strand 5
A
220 221anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
130 134first strand
Strand 2
B
119 124anti-parallel
Strand 3
B
108 113anti-parallel
Strand 4
B
87 89anti-parallel
Strand 5
B
138 140anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
173 177first strand
Strand 2
B
185 191anti-parallel
Strand 3
B
199 207anti-parallel
Strand 4
B
213 214anti-parallel
Strand 5
B
220 221anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il