Analysis of interatomic Contacts of Structural Units in PDB entry:
1G8K


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1G8K entry

There are 8 chains in PDB entry 1G8K (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 4GLY 825
B
 ARG 1ILE 133
C
 ASN 4GLY 825
D
 ARG 1ILE 133
E
 ASN 4GLY 825
F
 ARG 1ILE 133
G
 ASN 4GLY 825
H
 ARG 1ILE 133
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are161 helices in PDB entry 1G8K. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
44 47Right-handed 310
Helix 2
2
A
66 68Right-handed 310
Helix 3
3
A
101 109Right-handed 310
Helix 4
4
A
135 154Right-handed alpha
Helix 5
5
A
155 157Right-handed 310
Helix 6
6
A
172 185Right-handed alpha
Helix 7
7
A
204 210Right-handed alpha
Helix 8
8
A
218 225Right-handed alpha
Helix 9
9
A
234 239Right-handed alpha
Helix 10
10
A
239 246Right-handed alpha
Helix 11
11
A
246 252Right-handed alpha
Helix 12
12
A
255 263Right-handed alpha
Helix 13
13
A
281 292Right-handed alpha
Helix 14
14
A
305 321Right-handed alpha
Helix 15
15
A
324 331Right-handed alpha
Helix 16
16
A
334 342Right-handed alpha
Helix 17
17
A
345 354Right-handed alpha
Helix 18
18
A
356 369Right-handed alpha
Helix 19
19
A
384 389Right-handed alpha
Helix 20
20
A
392 407Right-handed alpha
Helix 21
21
A
439 446Right-handed alpha
Helix 22
22
A
458 463Right-handed alpha
Helix 23
23
A
465 486Right-handed alpha
Helix 24
24
A
491 504Right-handed alpha
Helix 25
25
A
518 523Right-handed 310
Helix 26
26
A
562 581Right-handed alpha
Helix 27
27
A
583 590Right-handed alpha
Helix 28
28
A
597 605Right-handed alpha
Helix 29
29
A
606 609Right-handed 310
Helix 30
30
A
621 628Right-handed 310
Helix 31
31
A
629 637Right-handed alpha
Helix 32
32
A
638 640Right-handed 310
Helix 33
33
A
684 694Right-handed alpha
Helix 34
34
A
712 715Right-handed 310
Helix 35
35
A
716 723Right-handed alpha
Helix 36
36
A
731 738Right-handed alpha
Helix 37
37
A
780 785Right-handed 310
Helix 38
38
A
810 817Right-handed alpha
Helix 39
39
B
15 17Right-handed 310
Helix 40
40
B
88 90Right-handed 310
Helix 41
41
C
44 47Right-handed 310
Helix 42
42
C
66 68Right-handed 310
Helix 43
43
C
101 103Right-handed 310
Helix 44
44
C
104 109Right-handed alpha
Helix 45
45
C
135 154Right-handed alpha
Helix 46
46
C
155 157Right-handed 310
Helix 47
47
C
172 185Right-handed alpha
Helix 48
48
C
204 210Right-handed alpha
Helix 49
49
C
218 225Right-handed alpha
Helix 50
50
C
234 239Right-handed alpha
Helix 51
51
C
239 246Right-handed alpha
Helix 52
52
C
246 252Right-handed alpha
Helix 53
53
C
255 263Right-handed alpha
Helix 54
54
C
281 292Right-handed alpha
Helix 55
55
C
305 321Right-handed alpha
Helix 56
56
C
324 331Right-handed alpha
Helix 57
57
C
334 342Right-handed alpha
Helix 58
58
C
345 354Right-handed alpha
Helix 59
59
C
356 369Right-handed alpha
Helix 60
60
C
384 389Right-handed alpha
Helix 61
61
C
392 407Right-handed alpha
Helix 62
62
C
439 446Right-handed alpha
Helix 63
63
C
458 463Right-handed alpha
Helix 64
64
C
465 486Right-handed alpha
Helix 65
65
C
491 503Right-handed alpha
Helix 66
66
C
504 506Right-handed 310
Helix 67
67
C
518 523Right-handed 310
Helix 68
68
C
562 581Right-handed alpha
Helix 69
69
C
583 590Right-handed alpha
Helix 70
70
C
597 605Right-handed alpha
Helix 71
71
C
606 609Right-handed 310
Helix 72
72
C
621 628Right-handed 310
Helix 73
73
C
629 637Right-handed alpha
Helix 74
74
C
638 640Right-handed 310
Helix 75
75
C
684 694Right-handed alpha
Helix 76
76
C
712 715Right-handed 310
Helix 77
77
C
716 723Right-handed alpha
Helix 78
78
C
731 739Right-handed alpha
Helix 79
79
C
780 785Right-handed 310
Helix 80
80
C
810 817Right-handed alpha
Helix 81
81
D
15 17Right-handed 310
Helix 82
82
E
44 47Right-handed 310
Helix 83
83
E
66 68Right-handed 310
Helix 84
84
E
101 103Right-handed 310
Helix 85
85
E
104 109Right-handed alpha
Helix 86
86
E
135 154Right-handed alpha
Helix 87
87
E
155 157Right-handed 310
Helix 88
88
E
172 185Right-handed alpha
Helix 89
89
E
204 210Right-handed alpha
Helix 90
90
E
220 225Right-handed alpha
Helix 91
91
E
234 239Right-handed alpha
Helix 92
92
E
239 246Right-handed alpha
Helix 93
93
E
246 252Right-handed alpha
Helix 94
94
E
255 263Right-handed alpha
Helix 95
95
E
281 292Right-handed alpha
Helix 96
96
E
305 321Right-handed alpha
Helix 97
97
E
324 331Right-handed alpha
Helix 98
98
E
334 342Right-handed alpha
Helix 99
99
E
345 354Right-handed alpha
Helix 100
100
E
356 369Right-handed alpha
Helix 101
101
E
384 389Right-handed alpha
Helix 102
102
E
392 407Right-handed alpha
Helix 103
103
E
439 446Right-handed alpha
Helix 104
104
E
458 463Right-handed alpha
Helix 105
105
E
465 486Right-handed alpha
Helix 106
106
E
491 504Right-handed alpha
Helix 107
107
E
518 523Right-handed 310
Helix 108
108
E
562 581Right-handed alpha
Helix 109
109
E
583 590Right-handed alpha
Helix 110
110
E
597 605Right-handed alpha
Helix 111
111
E
606 609Right-handed 310
Helix 112
112
E
621 628Right-handed 310
Helix 113
113
E
629 637Right-handed alpha
Helix 114
114
E
638 640Right-handed 310
Helix 115
115
E
684 694Right-handed alpha
Helix 116
116
E
712 715Right-handed 310
Helix 117
117
E
716 723Right-handed alpha
Helix 118
118
E
731 739Right-handed alpha
Helix 119
119
E
780 785Right-handed 310
Helix 120
120
E
810 817Right-handed alpha
Helix 121
121
F
15 17Right-handed 310
Helix 122
122
G
44 47Right-handed 310
Helix 123
123
G
66 68Right-handed 310
Helix 124
124
G
101 103Right-handed 310
Helix 125
125
G
104 109Right-handed alpha
Helix 126
126
G
135 154Right-handed alpha
Helix 127
127
G
155 157Right-handed 310
Helix 128
128
G
172 185Right-handed alpha
Helix 129
129
G
204 211Right-handed alpha
Helix 130
130
G
218 225Right-handed alpha
Helix 131
131
G
234 239Right-handed alpha
Helix 132
132
G
239 246Right-handed alpha
Helix 133
133
G
246 252Right-handed alpha
Helix 134
134
G
255 263Right-handed alpha
Helix 135
135
G
281 292Right-handed alpha
Helix 136
136
G
305 321Right-handed alpha
Helix 137
137
G
324 331Right-handed alpha
Helix 138
138
G
334 342Right-handed alpha
Helix 139
139
G
345 354Right-handed alpha
Helix 140
140
G
356 369Right-handed alpha
Helix 141
141
G
384 389Right-handed alpha
Helix 142
142
G
392 407Right-handed alpha
Helix 143
143
G
439 446Right-handed alpha
Helix 144
144
G
458 463Right-handed alpha
Helix 145
145
G
465 486Right-handed alpha
Helix 146
146
G
491 504Right-handed alpha
Helix 147
147
G
518 523Right-handed 310
Helix 148
148
G
562 581Right-handed alpha
Helix 149
149
G
583 590Right-handed alpha
Helix 150
150
G
597 605Right-handed alpha
Helix 151
151
G
606 609Right-handed 310
Helix 152
152
G
621 628Right-handed 310
Helix 153
153
G
629 637Right-handed alpha
Helix 154
154
G
638 640Right-handed 310
Helix 155
155
G
684 694Right-handed alpha
Helix 156
156
G
712 715Right-handed 310
Helix 157
157
G
716 723Right-handed alpha
Helix 158
158
G
731 739Right-handed alpha
Helix 159
159
G
780 785Right-handed 310
Helix 160
160
G
810 817Right-handed alpha
Helix 161
161
H
15 17Right-handed 310
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There are 44 sheets in PDB entry 1G8K. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH, AI, AJ, AK, AL, AM, AN, AO, AP, AQ, AR,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 20first strand
Strand 2
A
29 36anti-parallel
Strand 3
A
80 87anti-parallel
Strand 4
A
70 74anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 133first strand
Strand 2
A
124 126anti-parallel
Strand 3
A
526 529anti-parallel
Strand 4
A
509 514parallel
Strand 5
A
451 455parallel
Strand 6
A
159 163parallel
Strand 7
A
192 194parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
296 299first strand
Strand 2
A
272 276parallel
Strand 3
A
227 231parallel
Strand 4
A
379 383parallel
Strand 5
A
417 419parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 333first strand
Strand 2
A
673 674parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
428 429first strand
Strand 2
A
618 619anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
538 541first strand
Strand 2
A
546 550anti-parallel
Strand 3
A
641 642anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
647 649first strand
Strand 2
A
653 655anti-parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
696 701first strand
Strand 2
A
769 773parallel
Strand 3
A
727 730anti-parallel
Strand 4
A
754 761parallel
Strand 5
A
744 749anti-parallel
Strand 6
A
801 809anti-parallel
Strand 7
A
696 701anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 13first strand
Strand 2
B
115 122anti-parallel
Strand 3
B
104 109anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 26first strand
Strand 2
B
33 38anti-parallel
Strand 3
B
53 57anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 70first strand
Strand 2
B
75 77anti-parallel
Strand 3
B
84 86anti-parallel
Strand 4
B
93 95anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
15 20first strand
Strand 2
C
29 36anti-parallel
Strand 3
C
80 87anti-parallel
Strand 4
C
70 74anti-parallel
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There are 7 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
131 133first strand
Strand 2
C
124 126anti-parallel
Strand 3
C
526 529anti-parallel
Strand 4
C
509 514parallel
Strand 5
C
451 455parallel
Strand 6
C
159 163parallel
Strand 7
C
192 194parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
296 299first strand
Strand 2
C
272 276parallel
Strand 3
C
227 231parallel
Strand 4
C
379 383parallel
Strand 5
C
417 419parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
332 333first strand
Strand 2
C
673 674parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
428 429first strand
Strand 2
C
618 619anti-parallel
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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
538 541first strand
Strand 2
C
546 550anti-parallel
Strand 3
C
641 642anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
647 649first strand
Strand 2
C
653 655anti-parallel
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There are 7 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
696 701first strand
Strand 2
C
769 773parallel
Strand 3
C
727 730anti-parallel
Strand 4
C
754 761parallel
Strand 5
C
744 749anti-parallel
Strand 6
C
801 809anti-parallel
Strand 7
C
696 701anti-parallel
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There are 3 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
9 13first strand
Strand 2
D
115 122anti-parallel
Strand 3
D
104 109anti-parallel
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There are 3 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
23 26first strand
Strand 2
D
33 38anti-parallel
Strand 3
D
53 57anti-parallel
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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
68 70first strand
Strand 2
D
75 77anti-parallel
Strand 3
D
84 86anti-parallel
Strand 4
D
93 95anti-parallel
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There are 4 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
15 20first strand
Strand 2
E
29 36anti-parallel
Strand 3
E
80 87anti-parallel
Strand 4
E
70 74anti-parallel
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There are 7 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
131 133first strand
Strand 2
E
124 126anti-parallel
Strand 3
E
526 529anti-parallel
Strand 4
E
509 514parallel
Strand 5
E
451 455parallel
Strand 6
E
159 163parallel
Strand 7
E
192 194parallel
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There are 5 strands in Y sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
296 299first strand
Strand 2
E
272 276parallel
Strand 3
E
227 231parallel
Strand 4
E
379 383parallel
Strand 5
E
417 419parallel
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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
332 333first strand
Strand 2
E
673 674parallel
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There are 2 strands in AA sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
428 429first strand
Strand 2
E
618 619anti-parallel
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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
538 541first strand
Strand 2
E
546 550anti-parallel
Strand 3
E
641 642anti-parallel
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There are 2 strands in AC sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
647 649first strand
Strand 2
E
653 655anti-parallel
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There are 7 strands in AD sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
696 701first strand
Strand 2
E
769 773parallel
Strand 3
E
727 730anti-parallel
Strand 4
E
754 761parallel
Strand 5
E
744 749anti-parallel
Strand 6
E
801 809anti-parallel
Strand 7
E
696 701anti-parallel
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There are 3 strands in AE sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
9 13first strand
Strand 2
F
115 122anti-parallel
Strand 3
F
104 109anti-parallel
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There are 3 strands in AF sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
23 26first strand
Strand 2
F
33 38anti-parallel
Strand 3
F
53 57anti-parallel
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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
68 70first strand
Strand 2
F
75 77anti-parallel
Strand 3
F
84 86anti-parallel
Strand 4
F
93 95anti-parallel
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There are 4 strands in AH sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
15 20first strand
Strand 2
G
29 36anti-parallel
Strand 3
G
80 87anti-parallel
Strand 4
G
70 74anti-parallel
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There are 7 strands in AI sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
131 133first strand
Strand 2
G
124 126anti-parallel
Strand 3
G
526 529anti-parallel
Strand 4
G
509 514parallel
Strand 5
G
451 455parallel
Strand 6
G
159 163parallel
Strand 7
G
192 194parallel
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There are 5 strands in AJ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
296 299first strand
Strand 2
G
272 276parallel
Strand 3
G
227 231parallel
Strand 4
G
379 383parallel
Strand 5
G
417 419parallel
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There are 2 strands in AK sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
332 333first strand
Strand 2
G
673 674parallel
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There are 2 strands in AL sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
428 429first strand
Strand 2
G
618 619anti-parallel
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There are 3 strands in AM sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
538 541first strand
Strand 2
G
546 550anti-parallel
Strand 3
G
641 642anti-parallel
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There are 2 strands in AN sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
647 649first strand
Strand 2
G
653 655anti-parallel
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There are 7 strands in AO sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
696 701first strand
Strand 2
G
769 773parallel
Strand 3
G
727 730anti-parallel
Strand 4
G
754 761parallel
Strand 5
G
744 749anti-parallel
Strand 6
G
801 809anti-parallel
Strand 7
G
696 701anti-parallel
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There are 3 strands in AP sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
9 13first strand
Strand 2
H
115 122anti-parallel
Strand 3
H
104 109anti-parallel
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There are 3 strands in AQ sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
23 26first strand
Strand 2
H
33 38anti-parallel
Strand 3
H
53 57anti-parallel
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There are 4 strands in AR sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
68 70first strand
Strand 2
H
75 77anti-parallel
Strand 3
H
84 86anti-parallel
Strand 4
H
93 95anti-parallel
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