Analysis of interatomic Contacts of Structural Units in PDB entry:
1G8X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1G8X entry

There are 2 chains in PDB entry 1G8X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 2HIS 1010
B
ASN 2HIS 1010
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 92 helices in PDB entry 1G8X. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
9 16Right-handed alpha
Helix 2
2
A
82 86Right-handed 310
Helix 3
3
A
91 94Right-handed 310
Helix 4
4
A
98 111Right-handed alpha
Helix 5
5
A
136 144Right-handed alpha
Helix 6
6
A
147 151Right-handed 310
Helix 7
7
A
154 170Right-handed alpha
Helix 8
8
A
184 201Right-handed alpha
Helix 9
9
A
209 226Right-handed alpha
Helix 10
10
A
264 269Right-handed 310
Helix 11
11
A
278 288Right-handed alpha
Helix 12
12
A
289 297Right-handed alpha
Helix 13
13
A
300 304Right-handed 310
Helix 14
14
A
304 308Right-handed 310
Helix 15
15
A
319 335Right-handed alpha
Helix 16
16
A
337 355Right-handed alpha
Helix 17
17
A
372 383Right-handed alpha
Helix 18
18
A
385 395Right-handed alpha
Helix 19
19
A
411 442Right-handed alpha
Helix 20
20
A
465 497Right-handed alpha
Helix 21
21
A
510 519Right-handed alpha
Helix 22
22
A
524 533Right-handed alpha
Helix 23
23
A
539 552Right-handed alpha
Helix 24
24
A
583 590Right-handed alpha
Helix 25
25
A
593 601Right-handed alpha
Helix 26
26
A
605 614Right-handed alpha
Helix 27
27
A
614 619Right-handed alpha
Helix 28
28
A
629 646Right-handed alpha
Helix 29
29
A
668 679Right-handed alpha
Helix 30
30
A
680 689Right-handed alpha
Helix 31
31
A
698 706Right-handed alpha
Helix 32
32
A
707 709Right-handed 310
Helix 33
33
A
718 730Right-handed alpha
Helix 34
34
A
733 735Right-handed 310
Helix 35
35
A
749 791Right-handed alpha
Helix 36
36
A
797 814Right-handed alpha
Helix 37
37
A
815 839Right-handed alpha
Helix 38
38
A
852 905Right-handed alpha
Helix 39
39
A
905 910Right-handed alpha
Helix 40
40
A
921 925Right-handed 310
Helix 41
41
A
927 932Right-handed alpha
Helix 42
42
A
936 941Right-handed alpha
Helix 43
43
A
941 956Right-handed alpha
Helix 44
44
A
960 973Right-handed alpha
Helix 45
45
A
974 983Right-handed alpha
Helix 46
46
A
983 988Right-handed alpha
Helix 47
47
B
2 6Right-handed 310
Helix 48
48
B
9 15Right-handed alpha
Helix 49
49
B
82 86Right-handed 310
Helix 50
50
B
91 94Right-handed 310
Helix 51
51
B
98 111Right-handed alpha
Helix 52
52
B
136 143Right-handed alpha
Helix 53
53
B
154 170Right-handed alpha
Helix 54
54
B
184 201Right-handed alpha
Helix 55
55
B
207 209Right-handed 310
Helix 56
56
B
210 226Right-handed alpha
Helix 57
57
B
264 269Right-handed 310
Helix 58
58
B
278 288Right-handed alpha
Helix 59
59
B
289 294Right-handed alpha
Helix 60
60
B
300 304Right-handed 310
Helix 61
61
B
319 335Right-handed alpha
Helix 62
62
B
337 357Right-handed alpha
Helix 63
63
B
372 383Right-handed alpha
Helix 64
64
B
385 395Right-handed alpha
Helix 65
65
B
410 442Right-handed alpha
Helix 66
66
B
465 496Right-handed alpha
Helix 67
67
B
497 499Right-handed 310
Helix 68
68
B
509 519Right-handed alpha
Helix 69
69
B
524 533Right-handed alpha
Helix 70
70
B
539 552Right-handed alpha
Helix 71
71
B
583 588Right-handed alpha
Helix 72
72
B
593 602Right-handed alpha
Helix 73
73
B
605 614Right-handed alpha
Helix 74
74
B
614 619Right-handed alpha
Helix 75
75
B
629 646Right-handed alpha
Helix 76
76
B
668 679Right-handed alpha
Helix 77
77
B
680 689Right-handed alpha
Helix 78
78
B
698 706Right-handed alpha
Helix 79
79
B
707 709Right-handed 310
Helix 80
80
B
718 730Right-handed alpha
Helix 81
81
B
749 790Right-handed alpha
Helix 82
82
B
797 812Right-handed alpha
Helix 83
83
B
815 840Right-handed alpha
Helix 84
84
B
852 903Right-handed alpha
Helix 85
85
B
904 911Right-handed 310
Helix 86
86
B
917 925Right-handed alpha
Helix 87
87
B
926 935Right-handed alpha
Helix 88
88
B
935 940Right-handed alpha
Helix 89
89
B
940 954Right-handed alpha
Helix 90
90
B
960 972Right-handed alpha
Helix 91
91
B
974 1004Right-handed alpha
Helix 92
92
B
1005 1009Right-handed 310
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There are 12 sheets in PDB entry 1G8X. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
34 37first strand
Strand 2
A
48 56anti-parallel
Strand 3
A
59 63anti-parallel
Strand 4
A
69 73anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
116 119first strand
Strand 2
A
122 126anti-parallel
Strand 3
A
649 656parallel
Strand 4
A
173 179parallel
Strand 5
A
448 454parallel
Strand 6
A
240 247anti-parallel
Strand 7
A
253 261anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
227 228first strand
Strand 2
A
236 237anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
397 399first strand
Strand 2
A
404 406anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
558 559first strand
Strand 2
A
567 572anti-parallel
Strand 3
A
575 580anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
694 697first strand
Strand 2
A
743 746anti-parallel
Strand 3
A
737 739anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
34 37first strand
Strand 2
B
48 52anti-parallel
Strand 3
B
59 63anti-parallel
Strand 4
B
70 73anti-parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
116 119first strand
Strand 2
B
122 126anti-parallel
Strand 3
B
649 656parallel
Strand 4
B
173 179parallel
Strand 5
B
448 454parallel
Strand 6
B
240 247anti-parallel
Strand 7
B
253 261anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
227 228first strand
Strand 2
B
236 237anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
360 361first strand
Strand 2
B
367 368anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
558 559first strand
Strand 2
B
567 572anti-parallel
Strand 3
B
575 580anti-parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
694 697first strand
Strand 2
B
743 746anti-parallel
Strand 3
B
737 739anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il