Analysis of interatomic Contacts of Structural Units in PDB entry:
1GCJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GCJ entry

There are 2 chains in PDB entry 1GCJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 500SER 454
B
 PRO 500SER 454
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 1GCJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
501 8Right-handed alpha
Helix 2
2
A
14 33Right-handed alpha
Helix 3
3
A
32 46Right-handed alpha
Helix 4
4
A
50 63Right-handed alpha
Helix 5
5
A
69 83Right-handed alpha
Helix 6
6
A
84 99Right-handed alpha
Helix 7
7
A
107 121Right-handed alpha
Helix 8
8
A
122 124Right-handed 310
Helix 9
9
A
128 139Right-handed alpha
Helix 10
10
A
143 161Right-handed alpha
Helix 11
11
A
162 167Right-handed alpha
Helix 12
12
A
169 182Right-handed alpha
Helix 13
13
A
187 202Right-handed alpha
Helix 14
14
A
205 210Right-handed alpha
Helix 15
15
A
211 226Right-handed alpha
Helix 16
16
A
230 248Right-handed alpha
Helix 17
17
A
249 255Right-handed 310
Helix 18
18
A
259 269Right-handed alpha
Helix 19
19
A
272 303Right-handed alpha
Helix 20
20
A
313 319Right-handed alpha
Helix 21
21
A
318 330Right-handed alpha
Helix 22
22
A
331 333Right-handed 310
Helix 23
23
A
343 360Right-handed alpha
Helix 24
24
A
362 375Right-handed alpha
Helix 25
25
A
379 393Right-handed alpha
Helix 26
26
A
398 417Right-handed alpha
Helix 27
27
A
421 439Right-handed alpha
Helix 28
28
A
439 445Right-handed alpha
Helix 29
29
B
502 8Right-handed alpha
Helix 30
30
B
14 33Right-handed alpha
Helix 31
31
B
32 45Right-handed alpha
Helix 32
32
B
50 63Right-handed alpha
Helix 33
33
B
69 83Right-handed alpha
Helix 34
34
B
84 99Right-handed alpha
Helix 35
35
B
107 121Right-handed alpha
Helix 36
36
B
122 124Right-handed 310
Helix 37
37
B
128 139Right-handed alpha
Helix 38
38
B
143 161Right-handed alpha
Helix 39
39
B
162 167Right-handed alpha
Helix 40
40
B
169 182Right-handed alpha
Helix 41
41
B
187 202Right-handed alpha
Helix 42
42
B
205 210Right-handed alpha
Helix 43
43
B
211 226Right-handed alpha
Helix 44
44
B
230 246Right-handed alpha
Helix 45
45
B
248 255Right-handed 310
Helix 46
46
B
259 269Right-handed alpha
Helix 47
47
B
272 303Right-handed alpha
Helix 48
48
B
313 319Right-handed alpha
Helix 49
49
B
318 330Right-handed alpha
Helix 50
50
B
331 333Right-handed 310
Helix 51
51
B
343 360Right-handed alpha
Helix 52
52
B
362 375Right-handed alpha
Helix 53
53
B
379 393Right-handed alpha
Helix 54
54
B
398 417Right-handed alpha
Helix 55
55
B
421 439Right-handed alpha
Helix 56
56
B
439 445Right-handed alpha
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There is 1 sheet ( A) in PDB entry 1GCJ.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
447 450first strand
Strand 2
B
448 451anti-parallel
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