Analysis of interatomic Contacts of Structural Units in PDB entry:
1GEH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GEH entry

There are 5 chains in PDB entry 1GEH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 12PRO 443
B
 TYR 12PRO 443
C
 TYR 12PRO 443
D
 TYR 12PRO 443
E
 TYR 12PRO 443
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 95 helices in PDB entry 1GEH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
38 50Right-handed alpha
Helix 2
2
A
63 71Right-handed alpha
Helix 3
3
A
94 96Right-handed 310
Helix 4
4
A
100 109Right-handed alpha
Helix 5
5
A
110 115Right-handed 310
Helix 6
6
A
129 134Right-handed alpha
Helix 7
7
A
141 151Right-handed alpha
Helix 8
8
A
169 183Right-handed alpha
Helix 9
9
A
201 220Right-handed alpha
Helix 10
10
A
233 248Right-handed alpha
Helix 11
11
A
256 274Right-handed alpha
Helix 12
12
A
284 288Right-handed 310
Helix 13
13
A
297 309Right-handed alpha
Helix 14
14
A
325 339Right-handed alpha
Helix 15
15
A
374 382Right-handed alpha
Helix 16
16
A
391 396Right-handed alpha
Helix 17
17
A
400 416Right-handed alpha
Helix 18
18
A
420 426Right-handed alpha
Helix 19
19
A
428 437Right-handed alpha
Helix 20
20
B
38 50Right-handed alpha
Helix 21
21
B
63 71Right-handed alpha
Helix 22
22
B
94 96Right-handed 310
Helix 23
23
B
100 109Right-handed alpha
Helix 24
24
B
110 115Right-handed 310
Helix 25
25
B
129 134Right-handed alpha
Helix 26
26
B
141 151Right-handed alpha
Helix 27
27
B
169 183Right-handed alpha
Helix 28
28
B
201 220Right-handed alpha
Helix 29
29
B
233 248Right-handed alpha
Helix 30
30
B
256 274Right-handed alpha
Helix 31
31
B
284 288Right-handed 310
Helix 32
32
B
297 309Right-handed alpha
Helix 33
33
B
325 339Right-handed alpha
Helix 34
34
B
374 382Right-handed alpha
Helix 35
35
B
391 396Right-handed alpha
Helix 36
36
B
400 416Right-handed alpha
Helix 37
37
B
420 426Right-handed alpha
Helix 38
38
B
428 437Right-handed alpha
Helix 39
39
C
38 50Right-handed alpha
Helix 40
40
C
63 71Right-handed alpha
Helix 41
41
C
94 96Right-handed 310
Helix 42
42
C
100 109Right-handed alpha
Helix 43
43
C
110 115Right-handed 310
Helix 44
44
C
129 134Right-handed alpha
Helix 45
45
C
141 151Right-handed alpha
Helix 46
46
C
169 183Right-handed alpha
Helix 47
47
C
201 220Right-handed alpha
Helix 48
48
C
233 248Right-handed alpha
Helix 49
49
C
256 274Right-handed alpha
Helix 50
50
C
284 288Right-handed 310
Helix 51
51
C
297 309Right-handed alpha
Helix 52
52
C
325 339Right-handed alpha
Helix 53
53
C
374 382Right-handed alpha
Helix 54
54
C
391 396Right-handed alpha
Helix 55
55
C
400 416Right-handed alpha
Helix 56
56
C
420 426Right-handed alpha
Helix 57
57
C
428 437Right-handed alpha
Helix 58
58
D
38 50Right-handed alpha
Helix 59
59
D
63 71Right-handed alpha
Helix 60
60
D
94 96Right-handed 310
Helix 61
61
D
100 109Right-handed alpha
Helix 62
62
D
110 115Right-handed 310
Helix 63
63
D
129 134Right-handed alpha
Helix 64
64
D
141 151Right-handed alpha
Helix 65
65
D
169 183Right-handed alpha
Helix 66
66
D
201 220Right-handed alpha
Helix 67
67
D
233 248Right-handed alpha
Helix 68
68
D
256 274Right-handed alpha
Helix 69
69
D
285 290Right-handed alpha
Helix 70
70
D
297 309Right-handed alpha
Helix 71
71
D
325 339Right-handed alpha
Helix 72
72
D
374 382Right-handed alpha
Helix 73
73
D
391 396Right-handed alpha
Helix 74
74
D
400 416Right-handed alpha
Helix 75
75
D
420 426Right-handed alpha
Helix 76
76
D
428 437Right-handed alpha
Helix 77
77
E
38 50Right-handed alpha
Helix 78
78
E
63 71Right-handed alpha
Helix 79
79
E
94 96Right-handed 310
Helix 80
80
E
100 109Right-handed alpha
Helix 81
81
E
110 115Right-handed 310
Helix 82
82
E
129 134Right-handed alpha
Helix 83
83
E
141 151Right-handed alpha
Helix 84
84
E
169 183Right-handed alpha
Helix 85
85
E
201 220Right-handed alpha
Helix 86
86
E
233 248Right-handed alpha
Helix 87
87
E
256 274Right-handed alpha
Helix 88
88
E
285 290Right-handed alpha
Helix 89
89
E
297 309Right-handed alpha
Helix 90
90
E
325 339Right-handed alpha
Helix 91
91
E
374 382Right-handed alpha
Helix 92
92
E
391 396Right-handed alpha
Helix 93
93
E
400 416Right-handed alpha
Helix 94
94
E
420 426Right-handed alpha
Helix 95
95
E
428 437Right-handed alpha
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There are 20 sheets in PDB entry 1GEH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 76first strand
Strand 2
A
85 92anti-parallel
Strand 3
A
24 33anti-parallel
Strand 4
A
118 120anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 76first strand
Strand 2
A
85 92anti-parallel
Strand 3
A
24 33anti-parallel
Strand 4
A
122 127anti-parallel
Strand 5
A
295 296parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
225 227first strand
Strand 2
A
187 189parallel
Strand 3
A
157 160parallel
Strand 4
A
387 389parallel
Strand 5
A
363 367parallel
Strand 6
A
312 314parallel
Strand 7
A
277 281parallel
Strand 8
A
251 255parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
341 342first strand
Strand 2
A
354 355anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
73 76first strand
Strand 2
B
85 92anti-parallel
Strand 3
B
24 33anti-parallel
Strand 4
B
118 120anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
73 76first strand
Strand 2
B
85 92anti-parallel
Strand 3
B
24 33anti-parallel
Strand 4
B
122 127anti-parallel
Strand 5
B
295 296parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
225 227first strand
Strand 2
B
187 189parallel
Strand 3
B
157 160parallel
Strand 4
B
387 389parallel
Strand 5
B
363 367parallel
Strand 6
B
312 314parallel
Strand 7
B
277 281parallel
Strand 8
B
251 255parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
341 342first strand
Strand 2
B
354 355anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
73 76first strand
Strand 2
C
85 92anti-parallel
Strand 3
C
24 33anti-parallel
Strand 4
C
118 120anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
73 76first strand
Strand 2
C
85 92anti-parallel
Strand 3
C
24 33anti-parallel
Strand 4
C
122 127anti-parallel
Strand 5
C
295 296parallel
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There are 8 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
225 227first strand
Strand 2
C
187 189parallel
Strand 3
C
157 160parallel
Strand 4
C
387 389parallel
Strand 5
C
363 367parallel
Strand 6
C
312 314parallel
Strand 7
C
277 281parallel
Strand 8
C
251 255parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
341 342first strand
Strand 2
C
354 355anti-parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
73 76first strand
Strand 2
D
85 92anti-parallel
Strand 3
D
24 33anti-parallel
Strand 4
D
118 120anti-parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
73 76first strand
Strand 2
D
85 92anti-parallel
Strand 3
D
24 33anti-parallel
Strand 4
D
122 127anti-parallel
Strand 5
D
295 296parallel
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There are 8 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
225 227first strand
Strand 2
D
187 189parallel
Strand 3
D
157 160parallel
Strand 4
D
387 389parallel
Strand 5
D
363 367parallel
Strand 6
D
312 314parallel
Strand 7
D
277 281parallel
Strand 8
D
251 255parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
341 342first strand
Strand 2
D
354 355anti-parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
73 76first strand
Strand 2
E
85 92anti-parallel
Strand 3
E
24 33anti-parallel
Strand 4
E
118 120anti-parallel
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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
73 76first strand
Strand 2
E
85 92anti-parallel
Strand 3
E
24 33anti-parallel
Strand 4
E
122 127anti-parallel
Strand 5
E
295 296parallel
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There are 8 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
225 227first strand
Strand 2
E
187 189parallel
Strand 3
E
157 160parallel
Strand 4
E
387 389parallel
Strand 5
E
363 367parallel
Strand 6
E
312 314parallel
Strand 7
E
277 281parallel
Strand 8
E
251 255parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
341 342first strand
Strand 2
E
354 355anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il