Analysis of interatomic Contacts of Structural Units in PDB entry:
1GG1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GG1 entry

There are 4 chains in PDB entry 1GG1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 7ARG 349
B
 LEU 8GLY 350
C
 LEU 8ARG 349
D
 LEU 8GLY 350
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 1GG1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 26Right-handed alpha
Helix 2
3
A
65 83Right-handed alpha
Helix 3
4
A
118 136Right-handed alpha
Helix 4
5
A
149 154Right-handed alpha
Helix 5
6
A
155 157Right-handed 310
Helix 6
7
A
169 178Right-handed alpha
Helix 7
8
A
193 204Right-handed alpha
Helix 8
9
A
242 256Right-handed alpha
Helix 9
10
A
267 271Right-handed 310
Helix 10
11
A
276 291Right-handed alpha
Helix 11
12
A
330 349Right-handed alpha
Helix 12
13
B
18 26Right-handed alpha
Helix 13
14
B
29 48Right-handed alpha
Helix 14
15
B
65 83Right-handed alpha
Helix 15
16
B
118 136Right-handed alpha
Helix 16
17
B
149 154Right-handed alpha
Helix 17
18
B
155 157Right-handed 310
Helix 18
19
B
169 178Right-handed alpha
Helix 19
20
B
193 204Right-handed alpha
Helix 20
21
B
242 256Right-handed alpha
Helix 21
22
B
267 271Right-handed 310
Helix 22
23
B
274 276Right-handed 310
Helix 23
24
B
277 291Right-handed alpha
Helix 24
25
B
311 315Right-handed 310
Helix 25
26
B
330 350Right-handed alpha
Helix 26
27
C
18 26Right-handed alpha
Helix 27
29
C
65 83Right-handed alpha
Helix 28
30
C
118 136Right-handed alpha
Helix 29
31
C
149 154Right-handed alpha
Helix 30
32
C
155 157Right-handed 310
Helix 31
33
C
169 179Right-handed alpha
Helix 32
34
C
193 204Right-handed alpha
Helix 33
35
C
242 256Right-handed alpha
Helix 34
36
C
274 276Right-handed 310
Helix 35
37
C
277 292Right-handed alpha
Helix 36
38
C
330 349Right-handed alpha
Helix 37
39
D
18 26Right-handed alpha
Helix 38
40
D
29 49Right-handed alpha
Helix 39
41
D
65 83Right-handed alpha
Helix 40
42
D
118 136Right-handed alpha
Helix 41
43
D
149 154Right-handed alpha
Helix 42
44
D
155 157Right-handed 310
Helix 43
45
D
169 178Right-handed alpha
Helix 44
46
D
193 204Right-handed alpha
Helix 45
48
D
267 272Right-handed 310
Helix 46
49
D
274 276Right-handed 310
Helix 47
50
D
277 292Right-handed alpha
Helix 48
51
D
330 350Right-handed alpha
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There are 8 sheets in PDB entry 1GG1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 14first strand
Strand 2
B
218 223anti-parallel
Strand 3
B
207 212anti-parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 59first strand
Strand 2
A
87 92parallel
Strand 3
A
140 143parallel
Strand 4
A
159 162parallel
Strand 5
A
183 186parallel
Strand 6
A
229 233parallel
Strand 7
A
262 265parallel
Strand 8
A
296 302parallel
Strand 9
A
54 59parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 212first strand
Strand 2
A
218 223anti-parallel
Strand 3
B
10 15anti-parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 59first strand
Strand 2
B
87 92parallel
Strand 3
B
140 143parallel
Strand 4
B
159 162parallel
Strand 5
B
183 186parallel
Strand 6
B
229 233parallel
Strand 7
B
262 265parallel
Strand 8
B
296 302parallel
Strand 9
B
54 59parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
10 14first strand
Strand 2
D
218 223anti-parallel
Strand 3
D
207 212anti-parallel
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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
54 59first strand
Strand 2
C
87 92parallel
Strand 3
C
140 143parallel
Strand 4
C
159 162parallel
Strand 5
C
183 186parallel
Strand 6
C
229 233parallel
Strand 7
C
262 265parallel
Strand 8
C
296 302parallel
Strand 9
C
54 59parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
208 212first strand
Strand 2
C
218 223anti-parallel
Strand 3
D
10 15anti-parallel
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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
54 59first strand
Strand 2
D
87 92parallel
Strand 3
D
140 143parallel
Strand 4
D
159 162parallel
Strand 5
D
183 186parallel
Strand 6
D
229 233parallel
Strand 7
D
262 265parallel
Strand 8
D
296 302parallel
Strand 9
D
54 59parallel
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