Analysis of interatomic Contacts of Structural Units in PDB entry:
1GG4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1GG4 entry

There are 2 chains in PDB entry 1GG4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1GLN 447
B
 MSE 501GLN 947
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 1GG4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 13Right-handed alpha
Helix 2
2
A
30 34Right-handed 310
Helix 3
3
A
53 60Right-handed alpha
Helix 4
4
A
82 98Right-handed alpha
Helix 5
5
A
110 123Right-handed alpha
Helix 6
6
A
139 146Right-handed alpha
Helix 7
7
A
165 175Right-handed alpha
Helix 8
8
A
194 204Right-handed alpha
Helix 9
9
A
205 209Right-handed 310
Helix 10
10
A
223 232Right-handed alpha
Helix 11
11
A
280 296Right-handed alpha
Helix 12
12
A
299 308Right-handed alpha
Helix 13
13
A
336 350Right-handed alpha
Helix 14
14
A
366 383Right-handed alpha
Helix 15
15
A
394 401Right-handed alpha
Helix 16
16
A
409 424Right-handed alpha
Helix 17
17
A
434 438Right-handed 310
Helix 18
18
A
439 447Right-handed alpha
Helix 19
19
B
506 514Right-handed alpha
Helix 20
20
B
530 534Right-handed 310
Helix 21
21
B
553 561Right-handed alpha
Helix 22
22
B
582 597Right-handed alpha
Helix 23
23
B
610 626Right-handed alpha
Helix 24
24
B
639 646Right-handed alpha
Helix 25
25
B
665 675Right-handed alpha
Helix 26
26
B
694 704Right-handed alpha
Helix 27
27
B
705 709Right-handed 310
Helix 28
28
B
723 732Right-handed alpha
Helix 29
29
B
780 795Right-handed alpha
Helix 30
30
B
799 808Right-handed alpha
Helix 31
31
B
836 850Right-handed alpha
Helix 32
32
B
866 882Right-handed alpha
Helix 33
33
B
894 901Right-handed alpha
Helix 34
34
B
909 924Right-handed alpha
Helix 35
35
B
934 938Right-handed 310
Helix 36
36
B
939 947Right-handed alpha
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There are 12 sheets in PDB entry 1GG4. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 5first strand
Strand 2
A
23 24anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 18first strand
Strand 2
A
77 79anti-parallel
Strand 3
A
64 67parallel
Strand 4
A
39 41parallel
Strand 5
A
27 28parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
128 130first strand
Strand 2
A
154 158parallel
Strand 3
A
101 106parallel
Strand 4
A
178 181parallel
Strand 5
A
214 218parallel
Strand 6
A
235 239parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 255first strand
Strand 2
A
260 266anti-parallel
Strand 3
A
269 275anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
318 323first strand
Strand 2
A
326 330anti-parallel
Strand 3
A
427 432parallel
Strand 4
A
353 358parallel
Strand 5
A
386 390parallel
Strand 6
A
405 407parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
504 505first strand
Strand 2
B
523 524anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
516 518first strand
Strand 2
B
577 579anti-parallel
Strand 3
B
564 567parallel
Strand 4
B
539 541parallel
Strand 5
B
527 528parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
544 545first strand
Strand 2
B
548 549anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
628 630first strand
Strand 2
B
654 658parallel
Strand 3
B
601 606parallel
Strand 4
B
678 681parallel
Strand 5
B
714 718parallel
Strand 6
B
735 739parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
749 754first strand
Strand 2
B
760 766anti-parallel
Strand 3
B
769 775anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
818 823first strand
Strand 2
B
826 830anti-parallel
Strand 3
B
927 932parallel
Strand 4
B
853 858parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
889 890first strand
Strand 2
B
906 907parallel
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